CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92563	Canola	mitochondrion	94.91	94.91
CDY02590	Canola	cytosol	89.52	89.52
CDY47191	Canola	cytosol	87.43	88.22
AT5G19040.1	Thale cress	mitochondrion	86.23	87.27
CDX77492	Canola	plastid	55.69	56.02
CDX85119	Canola	plastid	55.69	56.02
VIT_05s0020g02630.t01	Wine grape	cytosol	52.69	53.33
GSMUA_AchrUn_...	Banana	cytosol	43.41	50.7
HORVU5Hr1G110100.1	Barley	mitochondrion	45.81	50.66
KRH11376	Soybean	extracellular	50.6	49.42
CDY18104	Canola	cytosol	41.62	49.12
CDX93935	Canola	plastid	49.1	49.1
CDX89173	Canola	mitochondrion, plastid	48.5	48.5
CDY67797	Canola	mitochondrion	47.9	48.19
CDY63340	Canola	plastid	47.9	48.19
KRH51017	Soybean	plastid	48.2	47.92
KRH02126	Soybean	plastid	48.5	47.65
Zm00001d034584_P001	Maize	plastid	45.51	46.2
OQU90772	Sorghum	plastid	46.11	45.29
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	44.31	44.98
PGSC0003DMT400083203	Potato	cytosol	44.01	44.55
Zm00001d013021_P001	Maize	plastid	44.91	44.51
TraesCS5A01G460000.1	Wheat	plastid	46.71	44.44
KRH20915	Soybean	cytosol	20.36	44.16
Os03t0810100-01	Rice	extracellular	47.01	43.98
TraesCS5D01G471100.1	Wheat	cytosol	45.51	43.3
TraesCS5B01G469600.1	Wheat	cytosol	45.21	43.02
EER96067	Sorghum	plastid	46.41	42.82
TraesCS5A01G181100.1	Wheat	mitochondrion	37.43	42.81
Zm00001d005239_P001	Maize	plastid	44.31	42.65
Zm00001d019171_P001	Maize	plastid	46.41	42.58
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	44.01	42.49
Os07t0211700-00	Rice	plastid	44.01	42.36
Zm00001d040810_P001	Maize	cytosol	44.61	42.33
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.13	42.32
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.13	42.32
TraesCS3D01G137000.1	Wheat	cytosol, plastid	43.71	41.71
Os05t0311801-00	Rice	cytosol	42.52	41.64
TraesCS3A01G136200.1	Wheat	mitochondrion	43.11	41.62
HORVU3Hr1G025950.1	Barley	cytosol	42.22	40.75
Os03t0358900-00	Rice	cytosol	39.52	40.24
EES02950	Sorghum	cytosol	44.01	39.95
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	38.92	39.88
Os03t0356900-01	Rice	extracellular	38.62	39.69
Zm00001d003869_P001	Maize	cytosol	37.72	39.13
GSMUA_AchrUn_...	Banana	mitochondrion	40.12	38.4
TraesCS5D01G185500.1	Wheat	plastid	36.83	38.32
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.53	38.01
EES12063	Sorghum	cytosol	38.32	37.65
CDY22984	Canola	plastid	34.43	37.46
CDY04228	Canola	plastid	35.03	36.68
CDY07385	Canola	plastid	35.03	36.56
CDY44896	Canola	plastid	36.23	36.12
CDX95461	Canola	plastid	35.03	36.11
CDY18571	Canola	plastid	34.43	35.49
TraesCS1B01G323900.1	Wheat	plastid	29.64	35.36
CDX81518	Canola	plastid	36.83	35.34
CDX82308	Canola	plastid	34.13	34.97
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	41.02	34.95
TraesCS1A01G057000.1	Wheat	cytosol	40.72	34.87
CDY30532	Canola	cytosol	33.23	23.92
CDY45111	Canola	plastid	12.87	19.55
CDX77133	Canola	plastid	34.43	16.2
CDX88863	Canola	plastid	21.56	15.55
CDX70907	Canola	plastid	21.56	15.55

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078FHM8	UniProt:A0A078FHM8
EnsemblPlants:CDY13945	ProteinID:CDY13945	ProteinID:CDY13945.1	ncoils:Coil	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00078430001	InterPro:IPT	HAMAP:MF_00185
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540
UniParc:UPI0004EDE7EC	SEG:seg	:	:	:	:

Description

BnaC09g38810DBnaC09g38810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHM8]

Coordinates

chrLK032039:-:352226..353230

Molecular Weight (calculated)

37937.9 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.215

Length

334 amino acids

Sequence
(BLAST)

001: MKPCMTNLRQ MIQPMLNFQR ISAGLNMVDV PFFRPKDKVV FIMGATGTGK SRLAIDLATR FPAEIVNSDK IQVYKGLDIV TNKVTPEESL GVPHHLLGTV
101: ENTHEDFAAE DYQREALRAV KSIVERNRVP IIAGGSNSYI EALVNNCVDF RLRYKCCFLW VDVDRPVLNS FVSDRVDKMV EMGLVDEVRR IFDPSSSDYS
201: AGIRRAIGVP ELDEFLRAEL CSYPAETTEK LLETAIKKIK ENNCLLACRQ YQKIKRLYKQ WKWNMRRIDA TEVFLRRGEE ADEAWENMVA RPSALAVDRF
301: LNYSNDHHLE GDAILLPEIS AVPPLPAAVA AISR

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.