Factsheet for VIT_05s0020g02630.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	55.45	57.01
AT5G19040.1	Thale cress	mitochondrion	56.06	56.06
VIT_09s0070g00710.t01	Wine grape	mitochondrion	51.82	55.16
CDY47191	Canola	cytosol	54.55	54.38
CDY02590	Canola	cytosol	54.85	54.19
Bra023701.1-P	Field mustard	cytosol	54.24	54.08
Bra002204.1-P	Field mustard	mitochondrion	53.64	52.99
CDX92563	Canola	mitochondrion	53.64	52.99
KRH02126	Soybean	plastid	54.55	52.94
CDY13945	Canola	mitochondrion	53.33	52.69
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	40.91	52.33
KRH51017	Soybean	plastid	53.03	52.08
CDX77492	Canola	plastid	51.82	51.51
Bra014968.1-P	Field mustard	plastid	51.52	51.2
CDX85119	Canola	plastid	51.52	51.2
GSMUA_AchrUn_...	Banana	cytosol	44.24	51.05
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	50.61	50.76
AT3G23630.1	Thale cress	mitochondrion, plastid	50.61	50.76
PGSC0003DMT400083203	Potato	cytosol	50.3	50.3
HORVU5Hr1G110100.1	Barley	mitochondrion	45.76	50.0
KRH11376	Soybean	extracellular	51.82	50.0
Bra028326.1-P	Field mustard	plastid	43.64	47.84
Zm00001d034584_P001	Maize	plastid	45.76	45.9
TraesCS5A01G181100.1	Wheat	mitochondrion	40.61	45.89
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	40.3	45.39
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	40.3	45.39
CDY18104	Canola	cytosol	38.48	44.88
Zm00001d013021_P001	Maize	plastid	45.76	44.81
OQU90772	Sorghum	plastid	46.06	44.71
HORVU3Hr1G025950.1	Barley	cytosol	45.76	43.64
Os05t0311801-00	Rice	cytosol	44.85	43.4
Os07t0211700-00	Rice	plastid	45.45	43.23
Zm00001d040810_P001	Maize	cytosol	46.06	43.18
Os03t0810100-01	Rice	extracellular	46.67	43.14
EER96067	Sorghum	plastid	47.27	43.09
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	45.15	43.06
Zm00001d005239_P001	Maize	plastid	45.15	42.94
TraesCS3D01G137000.1	Wheat	cytosol, plastid	45.45	42.86
TraesCS3A01G136200.1	Wheat	mitochondrion	44.85	42.77
TraesCS5A01G460000.1	Wheat	plastid	45.45	42.73
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	41.52	42.68
EES02950	Sorghum	cytosol	47.58	42.66
KRH20915	Soybean	cytosol	19.7	42.21
TraesCS5D01G471100.1	Wheat	cytosol	44.85	42.17
TraesCS5B01G469600.1	Wheat	cytosol	44.85	42.17
TraesCS5D01G185500.1	Wheat	plastid	40.3	41.43
VIT_01s0011g03640.t01	Wine grape	plastid	41.21	41.21
Zm00001d019171_P001	Maize	plastid	45.15	40.93
Os03t0356900-01	Rice	extracellular	39.7	40.31
Os03t0358900-00	Rice	cytosol	39.7	39.94
Zm00001d003869_P001	Maize	cytosol	38.79	39.75
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	39.09	39.57
GSMUA_AchrUn_...	Banana	mitochondrion	41.52	39.26
EES12063	Sorghum	cytosol	39.7	38.53
TraesCS1A01G057000.1	Wheat	cytosol	40.61	34.36
TraesCS1B01G323900.1	Wheat	plastid	28.79	33.93
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	40.0	33.67
VIT_06s0061g01410.t01	Wine grape	nucleus	38.18	26.58
VIT_19s0014g01630.t01	Wine grape	mitochondrion	20.91	17.42

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100249482	wikigene:100249482	MapMan:11.4.1.1	Gene3D:3.40.50.300
EMBL:AM430730	ProteinID:CAN64738	ProteinID:CAN64738.1	ProteinID:CCB50383	ProteinID:CCB50383.1	UniProt:F6HDL2
EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	InterPro:IPT	EntrezGene:LOC100249482
wikigene:LOC100249482	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	SUPFAM:SSF52540
UniParc:UPI000198337A	ArrayExpress:VIT_05s0020g02630	EnsemblPlantsGene:VIT_05s0020g02630	EnsemblPlants:VIT_05s0020g02630.t01	unigene:Vvi.24216	RefSeq:XP_002277591
RefSeq:XP_002277591.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:4315778..4317278

Molecular Weight (calculated)

36834.8 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.112

Length

330 amino acids

Sequence
(BLAST)

001: MMRTILSACK QAQTPLLDIS GLNMELFNPR RRKEKVVFVI GATGTGKSKL SIDLATRFPS EIINSDKMQV YKGLHIVTNK VTEEECRGVP HHLLGIADPN
101: TNFTAMDFCH HASLAIQSIT ARNRHPIIAG GSNSFIEALV TDVPEFKSRY ECCFLWVDVS LPVLHRFVSE RVDRMLEAGL VEEVRRIFDP EADYSRGIRR
201: AIGVPEMDQF LRGERIVGDK IAAQYLRKAI AKIKENTCKL ACSQLDKIHR LQNIRGWKIH RLDATEAFLK RGDDAEEAWE KHVAGPSMDI VGCFLRHQDC
301: VPNIVVPVPV PSTAIIGSTV PMTAVAAASH

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.