CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020081.1-P	Field mustard	plastid	95.91	45.47
CDX88863	Canola	plastid	88.18	41.9
CDX70907	Canola	plastid	87.27	41.47
AT5G20040.3	Thale cress	mitochondrion	83.64	39.23
VIT_19s0014g01630.t01	Wine grape	mitochondrion	65.45	36.36
KRH21996	Soybean	mitochondrion	65.91	32.37
PGSC0003DMT400039795	Potato	mitochondrion	65.0	31.78
Solyc12g014190.1.1	Tomato	mitochondrion	64.09	31.4
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	50.91	27.38
KXG36879	Sorghum	mitochondrion	55.0	27.19
TraesCS7A01G560300.1	Wheat	mitochondrion	51.82	25.17
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	51.82	25.11
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	50.45	24.56
HORVU7Hr1G120070.12	Barley	mitochondrion	50.45	22.84
OQU77179	Sorghum	mitochondrion	51.82	22.57
CDX95461	Canola	plastid	20.91	14.2
CDY63340	Canola	plastid	21.36	14.16
CDY67797	Canola	mitochondrion	21.36	14.16
CDY04228	Canola	plastid	20.45	14.11
CDY07385	Canola	plastid	20.45	14.06
CDY44896	Canola	plastid	21.36	14.03
CDY22984	Canola	plastid	19.55	14.01
CDX93935	Canola	plastid	20.91	13.77
CDY18571	Canola	plastid	20.0	13.58
CDX81518	Canola	plastid	21.36	13.51
CDX89173	Canola	mitochondrion, plastid	20.45	13.47
CDY02590	Canola	cytosol	20.45	13.47
CDY47191	Canola	cytosol	19.55	12.99
CDX82308	Canola	plastid	19.09	12.88
CDY13945	Canola	mitochondrion	19.55	12.87
CDX92563	Canola	mitochondrion	19.09	12.57
CDY30532	Canola	cytosol	26.36	12.5
CDX85119	Canola	plastid	18.18	12.05
CDX77492	Canola	plastid	18.18	12.05
GSMUA_Achr1P06960_001	Banana	cytosol	10.91	9.64
CDX77133	Canola	plastid	27.27	8.45
CDY18104	Canola	cytosol	7.27	5.65

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:3.40.50.300	MapMan:50.2.5	GO:A0A078I5E6	UniProt:A0A078I5E6	EnsemblPlants:CDY45111
ProteinID:CDY45111	ProteinID:CDY45111.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00081395001	InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF50	MetaCyc:PWY-2781	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI0004EE6C1B	:

Description

BnaA02g04650DBnaA02g04650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5E6]

Coordinates

chrLK032613:+:219594..220797

Molecular Weight (calculated)

24323.2 Da

IEP (calculated)

9.605

GRAVY (calculated)

-0.261

Length

220 amino acids

Sequence
(BLAST)

001: MVIIHSGVVL TRTCSSRLQP PCLVFRRRFS GAATTCSVSL NGKRNSEKEK VIVISGPTGA GKSKLALELA KRLNGEIISA DSVQVYKGLD VGSAKPSASD
101: RKEVPHHLID ILHPSQDYSV GQFFEDGRQA TKDILSRGRV PIVTGGTGLY LRWFIYGKPD LPKPSPEIVS EVHDMLIDFQ TDYNWDGAVE FVVNAGDQKA
201: SSLPRNDWYR LRRSLEILKV

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.