CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35941	Soybean	cytosol	83.98	63.82
VIT_01s0011g03640.t01	Wine grape	plastid	59.74	41.82
PGSC0003DMT400037749	Potato	cytosol	45.45	37.1
Solyc05g009410.1.1	Tomato	cytosol	45.45	37.1
GSMUA_Achr3P29480_001	Banana	cytosol	41.56	36.78
CDY07385	Canola	plastid	50.65	36.56
Bra004037.1-P	Field mustard	plastid	52.38	36.34
CDY04228	Canola	plastid	49.78	36.05
CDY44896	Canola	plastid	51.95	35.82
CDX81518	Canola	plastid	53.68	35.63
PGSC0003DMT400015411	Potato	cytosol	42.86	35.61
GSMUA_Achr1P12830_001	Banana	cytosol	18.61	35.54
Bra037537.1-P	Field mustard	plastid	49.78	35.49
CDY18571	Canola	plastid	49.78	35.49
CDX95461	Canola	plastid	49.35	35.19
AT1G68460.1	Thale cress	plastid	53.68	34.73
Bra033933.1-P	Field mustard	plastid	54.11	34.34
CDY22984	Canola	plastid	45.02	33.88
KRH67172	Soybean	plastid	44.59	33.33
CDX82308	Canola	plastid	46.75	33.13
Solyc04g007240.1.1	Tomato	plastid	46.32	32.92
AT3G19160.1	Thale cress	plastid	46.75	32.73
AT4G24650.1	Thale cress	cytosol	45.02	32.7
Bra001737.1-P	Field mustard	plastid	45.45	32.11
GSMUA_Achr1P23110_001	Banana	cytosol	42.86	32.04
GSMUA_Achr2P06730_001	Banana	cytosol	14.29	31.73
KRG95498	Soybean	mitochondrion	42.42	31.61
KRH20915	Soybean	cytosol	20.78	31.17
KRH71448	Soybean	golgi, mitochondrion, plastid	43.29	30.58
KRH31999	Soybean	mitochondrion	45.45	30.52
GSMUA_Achr4P06810_001	Banana	cytosol	40.26	30.39
AT1G25410.1	Thale cress	plastid	44.59	30.12
KRH46921	Soybean	cytosol	37.66	29.69
KRH51017	Soybean	plastid	42.86	29.46
KRH02126	Soybean	plastid	42.86	29.12
KRH01762	Soybean	extracellular, golgi, vacuole	41.13	28.53
KRH11376	Soybean	extracellular	41.99	28.36
Os01t0688300-00	Rice	mitochondrion	39.39	27.08
Zm00001d011618_P001	Maize	plastid	39.83	26.44
Os07t0190150-00	Rice	cytosol	26.41	25.96
TraesCS1B01G396700.1	Wheat	plastid	38.53	25.72
Zm00001d043812_P001	Maize	plastid	39.39	25.71
TraesCS3B01G296500.1	Wheat	plastid	40.26	25.55
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	40.69	25.47
TraesCS3D01G263000.1	Wheat	plastid	40.26	25.2
Zm00001d038921_P001	Maize	mitochondrion, plastid	39.83	24.93
HORVU1Hr1G083530.2	Barley	plastid	40.26	24.8
Os05t0551700-01	Rice	mitochondrion	38.53	24.72
KXG33157	Sorghum	mitochondrion, plastid	39.39	24.33
TraesCS1D01G383600.1	Wheat	plastid	39.83	23.47
TraesCS1A01G376300.1	Wheat	plastid	39.39	23.16
KXG22495	Sorghum	mitochondrion	38.53	22.88
HORVU0Hr1G006770.3	Barley	cytosol	26.41	21.94
GSMUA_Achr9P21400_001	Banana	cytosol	25.11	20.94
KRH30498	Soybean	cytosol	36.36	17.57
KRH25178	Soybean	cytosol	19.91	15.28
KRH21996	Soybean	mitochondrion	23.81	12.28

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	Gene3D:3.40.50.300	MapMan:50.2.5	EMBL:ACUP02012646	EMBL:ACUP02012647
EnsemblPlantsGene:GLYMA_20G116500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	InterPro:IPT	UniProt:K7N2W8
EnsemblPlants:KRG90838	ProteinID:KRG90838	ProteinID:KRG90838.1	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51
MetaCyc:PWY-2781	UniParc:UPI0002952943	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:35893018..35894668

Molecular Weight (calculated)

26356.6 Da

IEP (calculated)

10.146

GRAVY (calculated)

-0.582

Length

231 amino acids

Sequence
(BLAST)

001: MRLSILQPHP HPHRIKRWPR IDASSFHRRK DKVVVIMGAT GSGKSRLSID LATLFPSSEI INSDKMQVYR GLDITTNKIP PAQRRGVPHQ LLGDVDTEHH
101: VDDMLNSGMV DELAQFFDQD AARRTGFGLR KAIGVPEFDR FFNKYPPSMG QGDDPLRESA YQEAVRAIKD NTCELAERQI GKIERLKRAG WDLRRIDATE
201: AFRGVLTSGS DVWERQVLEP SVKIVKRFLR E

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.