Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400092830 Potato cytosol 47.54 84.91
PGSC0003DMT400088950 Potato cytosol 61.27 81.69
PGSC0003DMT400092576 Potato cytosol 45.07 81.53
PGSC0003DMT400091323 Potato cytosol 41.2 79.59
PGSC0003DMT400088770 Potato cytosol 43.31 78.85
PGSC0003DMT400097056 Potato mitochondrion 32.39 78.63
PGSC0003DMT400084902 Potato cytosol 48.59 78.41
PGSC0003DMT400087375 Potato cytosol 22.54 77.11
PGSC0003DMT400097181 Potato cytosol 55.99 74.65
PGSC0003DMT400091399 Potato cytosol 36.97 73.43
PGSC0003DMT400086959 Potato cytosol 20.77 72.84
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 55.63 71.17
PGSC0003DMT400088039 Potato cytosol 34.51 69.5
PGSC0003DMT400097535 Potato mitochondrion 42.25 68.97
PGSC0003DMT400097110 Potato cytosol 39.79 68.9
PGSC0003DMT400090908 Potato cytosol 52.82 65.79
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 45.42 65.48
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 38.73 65.48
PGSC0003DMT400096405 Potato cytosol 38.03 65.06
PGSC0003DMT400087535 Potato cytosol 61.62 64.34
PGSC0003DMT400088320 Potato cytosol 30.99 64.23
PGSC0003DMT400086561 Potato cytosol 22.89 63.73
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 25.0 62.83
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 28.87 61.65
PGSC0003DMT400088851 Potato cytosol 51.76 61.51
PGSC0003DMT400093701 Potato cytosol 53.52 61.04
PGSC0003DMT400090493 Potato cytosol 78.17 60.16
PGSC0003DMT400085031 Potato cytosol 27.11 58.78
PGSC0003DMT400086264 Potato cytosol 56.34 56.94
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 35.56 56.42
PGSC0003DMT400085014 Potato cytosol 42.96 54.46
PGSC0003DMT400093314 Potato cytosol 60.21 53.94
PGSC0003DMT400093491 Potato cytosol 46.48 53.88
PGSC0003DMT400088552 Potato cytosol 34.51 52.97
PGSC0003DMT400088899 Potato cytosol 40.85 52.25
PGSC0003DMT400089640 Potato mitochondrion 47.18 51.94
PGSC0003DMT400087085 Potato cytosol 52.11 49.66
PGSC0003DMT400086337 Potato cytosol 51.41 49.32
PGSC0003DMT400085022 Potato cytosol 46.83 48.54
PGSC0003DMT400090073 Potato cytosol 41.2 48.15
PGSC0003DMT400091271 Potato cytosol 21.13 47.62
PGSC0003DMT400090406 Potato cytosol 53.52 46.91
PGSC0003DMT400085869 Potato cytosol 53.52 43.06
PGSC0003DMT400086709 Potato cytosol 38.03 42.35
PGSC0003DMT400095385 Potato cytosol 59.86 41.26
PGSC0003DMT400086310 Potato cytosol 17.61 40.98
PGSC0003DMT400092288 Potato cytosol 29.93 40.09
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 24.3 39.88
PGSC0003DMT400087380 Potato cytosol 22.54 38.1
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 34.15 37.6
PGSC0003DMT400097346 Potato cytosol 17.61 37.31
PGSC0003DMT400091817 Potato cytosol 19.72 36.84
PGSC0003DMT400095880 Potato cytosol 16.55 35.34
PGSC0003DMT400088765 Potato cytosol 36.27 34.92
PGSC0003DMT400087595 Potato cytosol 16.55 34.06
PGSC0003DMT400093361 Potato cytosol 55.63 33.83
PGSC0003DMT400090690 Potato cytosol 16.2 33.09
PGSC0003DMT400002509 Potato mitochondrion 34.86 31.03
PGSC0003DMT400096448 Potato cytosol 11.27 30.77
PGSC0003DMT400037749 Potato cytosol 30.28 30.39
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 31.34 30.38
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 31.34 30.38
PGSC0003DMT400094882 Potato cytosol 23.94 30.22
TraesCS5A01G181100.1 Wheat mitochondrion 30.99 30.14
HORVU5Hr1G110100.1 Barley mitochondrion 32.04 30.13
KRH46921 Soybean cytosol 30.99 30.03
PGSC0003DMT400083203 Potato cytosol 34.86 30.0
PGSC0003DMT400015411 Potato cytosol 29.23 29.86
KRH01762 Soybean extracellular, golgi, vacuole 33.45 28.53
Zm00001d034584_P001 Maize plastid 32.75 28.27
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 31.34 27.73
PGSC0003DMT400068836 Potato cytosol 19.37 27.5
HORVU3Hr1G025950.1 Barley cytosol 33.45 27.46
TraesCS5D01G185500.1 Wheat plastid 30.99 27.41
OQU90772 Sorghum plastid 32.75 27.35
Zm00001d005239_P001 Maize plastid 32.75 26.8
EER96067 Sorghum plastid 34.15 26.8
TraesCS3A01G136200.1 Wheat mitochondrion 32.39 26.59
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 32.39 26.59
TraesCS5A01G460000.1 Wheat plastid 32.39 26.21
Os03t0356900-01 Rice extracellular 29.93 26.15
TraesCS5B01G469600.1 Wheat cytosol 32.04 25.93
Zm00001d040810_P001 Maize cytosol 32.04 25.85
Zm00001d013021_P001 Maize plastid 30.63 25.82
Os03t0810100-01 Rice extracellular 32.39 25.77
TraesCS5D01G471100.1 Wheat cytosol 31.69 25.64
Zm00001d003869_P001 Maize cytosol 28.87 25.47
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 29.23 25.46
TraesCS3D01G137000.1 Wheat cytosol, plastid 31.34 25.43
Os03t0358900-00 Rice cytosol 29.23 25.3
Os05t0311801-00 Rice cytosol 30.28 25.22
Zm00001d019171_P001 Maize plastid 32.04 25.0
Os07t0211700-00 Rice plastid 30.28 24.78
PGSC0003DMT400096037 Potato cytosol 8.8 24.75
EES02950 Sorghum cytosol 32.04 24.73
EES12063 Sorghum cytosol 28.87 24.12
PGSC0003DMT400068271 Potato cytosol 30.99 23.22
TraesCS1B01G323900.1 Wheat plastid 22.89 23.21
PGSC0003DMT400090318 Potato cytosol 8.45 23.08
TraesCS1A01G057000.1 Wheat cytosol 29.93 21.79
PGSC0003DMT400095744 Potato cytosol 13.38 21.11
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 28.87 20.92
PGSC0003DMT400026622 Potato cytosol 20.42 17.52
PGSC0003DMT400096524 Potato cytosol, nucleus 61.97 15.84
PGSC0003DMT400039795 Potato mitochondrion 17.61 11.11
Protein Annotations
EnsemblPlants:PGSC0003DMT400089330EnsemblPlantsGene:PGSC0003DMG400038901Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400038901SEG:segSUPFAM:SSF52540UniParc:UPI0002955DE4
UniProt:M1DHY3MapMan:11.4.1.1::::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400038901]
Coordinates
chr4:-:34474184..34477586
Molecular Weight (calculated)
32492.5 Da
IEP (calculated)
8.530
GRAVY (calculated)
-0.217
Length
284 amino acids
Sequence
(BLAST)
001: MGATGMGKSR LSADIATYFQ GEITNSDKMQ VYKGLEIVTN KITHAEKQGV RHYFLGEIEP NSEFTAEDLC LESILYIEFF LKTQCVPIIV GGSISYIEKL
101: VEKPMFMFKY KYDSCFIWID VEQSVLNRRV DTRVDEMVNA AKTNTFINNN NNKFNKKKVE FIRGATGMGK SFLSTDIATH FRGEIIYSDK MKVYKGLEIV
201: TNKITHAKKQ GVRHYLLGLV DEVQQIFILD AYYTKGIRRC IGVPEMARYL TEEKNIDGDD ESKKMILQAS ISIIKCNTRI LICN
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.