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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • plastid 2
  • vacuole 1
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400087375 Potato cytosol 51.88 83.13
PGSC0003DMT400097056 Potato mitochondrion 66.92 76.07
PGSC0003DMT400086561 Potato cytosol 52.63 68.63
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 54.89 64.6
PGSC0003DMT400088039 Potato cytosol 62.41 58.87
PGSC0003DMT400091323 Potato cytosol 64.66 58.5
PGSC0003DMT400091399 Potato cytosol 60.15 55.94
PGSC0003DMT400097110 Potato cytosol 63.91 51.83
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 62.41 49.4
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 65.41 44.16
PGSC0003DMT400088950 Potato cytosol 67.67 42.25
PGSC0003DMT400088552 Potato cytosol 57.89 41.62
PGSC0003DMT400084902 Potato cytosol 54.14 40.91
PGSC0003DMT400097181 Potato cytosol 63.91 39.91
PGSC0003DMT400088770 Potato cytosol 45.86 39.1
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 50.38 38.73
PGSC0003DMT400092288 Potato cytosol 61.65 38.68
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 62.41 37.39
PGSC0003DMT400085031 Potato cytosol 34.59 35.11
PGSC0003DMT400087380 Potato cytosol 43.61 34.52
PGSC0003DMT400087535 Potato cytosol 68.42 33.46
PGSC0003DMT400086709 Potato cytosol 63.91 33.33
PGSC0003DMT400096405 Potato cytosol 41.35 33.13
PGSC0003DMT400092576 Potato cytosol 37.59 31.85
PGSC0003DMT400092830 Potato cytosol 36.09 30.19
PGSC0003DMT400089330 Potato cytosol 61.65 28.87
PGSC0003DMT400086264 Potato cytosol 60.9 28.83
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 38.35 28.49
PGSC0003DMT400089640 Potato mitochondrion 54.89 28.29
PGSC0003DMT400097535 Potato mitochondrion 36.84 28.16
PGSC0003DMT400085022 Potato cytosol 57.14 27.74
PGSC0003DMT400090908 Potato cytosol 45.86 26.75
PGSC0003DMT400093314 Potato cytosol 60.9 25.55
PGSC0003DMT400088851 Potato cytosol 45.86 25.52
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 48.87 25.19
PGSC0003DMT400088765 Potato cytosol 54.89 24.75
PGSC0003DMT400093701 Potato cytosol 44.36 23.69
PGSC0003DMT400085014 Potato cytosol 38.35 22.77
PGSC0003DMT400090493 Potato cytosol 63.16 22.76
PGSC0003DMT400090406 Potato cytosol 54.89 22.53
PGSC0003DMT400085869 Potato cytosol 57.89 21.81
PGSC0003DMT400093491 Potato cytosol 39.85 21.63
PGSC0003DMT400088899 Potato cytosol 36.09 21.62
PGSC0003DMT400086337 Potato cytosol 47.37 21.28
PGSC0003DMT400095385 Potato cytosol 64.66 20.87
PGSC0003DMT400087085 Potato cytosol 46.62 20.81
PGSC0003DMT400090073 Potato cytosol 37.59 20.58
PGSC0003DMT400026622 Potato cytosol 51.13 20.54
PGSC0003DMT400037749 Potato cytosol 41.35 19.43
PGSC0003DMT400015411 Potato cytosol 40.6 19.42
PGSC0003DMT400093361 Potato cytosol 65.41 18.63
HORVU5Hr1G110100.1 Barley mitochondrion 41.35 18.21
PGSC0003DMT400002509 Potato mitochondrion 42.86 17.87
TraesCS5A01G181100.1 Wheat mitochondrion 39.1 17.81
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 39.1 17.75
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 39.1 17.75
TraesCS1B01G323900.1 Wheat plastid 36.84 17.5
PGSC0003DMT400083203 Potato cytosol 42.86 17.27
KRH46921 Soybean cytosol 37.59 17.06
OQU90772 Sorghum plastid 42.11 16.47
Zm00001d005239_P001 Maize plastid 42.86 16.43
Zm00001d034584_P001 Maize plastid 40.6 16.41
KRH01762 Soybean extracellular, golgi, vacuole 40.6 16.22
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 39.1 16.2
Zm00001d040810_P001 Maize cytosol 42.86 16.19
EER96067 Sorghum plastid 43.61 16.02
TraesCS5A01G460000.1 Wheat plastid 42.11 15.95
TraesCS5B01G469600.1 Wheat cytosol 42.11 15.95
EES02950 Sorghum cytosol 43.61 15.76
TraesCS3D01G137000.1 Wheat cytosol, plastid 41.35 15.71
TraesCS5D01G471100.1 Wheat cytosol 41.35 15.67
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 38.35 15.64
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 40.6 15.61
TraesCS5D01G185500.1 Wheat plastid 37.59 15.58
Os07t0211700-00 Rice plastid 40.6 15.56
Os05t0311801-00 Rice cytosol 39.85 15.54
Zm00001d013021_P001 Maize plastid 39.1 15.43
Os03t0810100-01 Rice extracellular 41.35 15.41
Zm00001d019171_P001 Maize plastid 42.11 15.38
HORVU3Hr1G025950.1 Barley cytosol 39.85 15.32
Os03t0356900-01 Rice extracellular 36.84 15.08
Zm00001d003869_P001 Maize cytosol 36.09 14.91
TraesCS3A01G136200.1 Wheat mitochondrion 38.35 14.74
PGSC0003DMT400068271 Potato cytosol 41.35 14.51
Os03t0358900-00 Rice cytosol 35.34 14.33
EES12063 Sorghum cytosol 36.09 14.12
TraesCS1A01G057000.1 Wheat cytosol 40.6 13.85
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 37.59 12.76
PGSC0003DMT400039795 Potato mitochondrion 30.08 8.89
PGSC0003DMT400096524 Potato cytosol, nucleus 63.91 7.65
PGSC0003DMT400094882 Potato cytosol 6.02 3.56
PGSC0003DMT400068836 Potato cytosol 3.76 2.5
PGSC0003DMT400095744 Potato cytosol 3.01 2.22
PGSC0003DMT400088320 Potato cytosol 1.5 1.46
PGSC0003DMT400087595 Potato cytosol 0.75 0.72
PGSC0003DMT400090690 Potato cytosol 0.75 0.72
PGSC0003DMT400091817 Potato cytosol 0.75 0.66
PGSC0003DMT400086310 Potato cytosol 0.0 0.0
PGSC0003DMT400086959 Potato cytosol 0.0 0.0
PGSC0003DMT400090318 Potato cytosol 0.0 0.0
PGSC0003DMT400091271 Potato cytosol 0.0 0.0
PGSC0003DMT400095880 Potato cytosol 0.0 0.0
PGSC0003DMT400096037 Potato cytosol 0.0 0.0
PGSC0003DMT400096448 Potato cytosol 0.0 0.0
PGSC0003DMT400097346 Potato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400094329EnsemblPlantsGene:PGSC0003DMG400043900Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400043900SUPFAM:SSF52540UniParc:UPI0002953B20UniProt:M1DTW7
MapMan:50.2.5:::::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400043900]
Coordinates
chr1:-:48634181..48634937
Molecular Weight (calculated)
14984.1 Da
IEP (calculated)
7.412
GRAVY (calculated)
-0.161
Length
133 amino acids
Sequence
(BLAST)
001: MGATGTGKSR LSVDLATNFR GEIINSDKMQ VYKGLDIVTN KITHAEKQGV RHYLLGEIEP DSDLTAEDFC LKSIVFIENI LNTQSVPIII RGSYSYIEKL
101: VGWWMRCGKF SFQMQITPKE SDGPLVSLKW PNI
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.