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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 1
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400087375 Potato cytosol 33.53 69.88
PGSC0003DMT400086561 Potato cytosol 35.26 59.8
PGSC0003DMT400097056 Potato mitochondrion 37.57 55.56
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 33.53 51.33
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 38.73 50.38
PGSC0003DMT400091323 Potato cytosol 39.31 46.26
PGSC0003DMT400091399 Potato cytosol 36.42 44.06
PGSC0003DMT400088039 Potato cytosol 35.84 43.97
PGSC0003DMT400097110 Potato cytosol 39.31 41.46
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 37.57 38.69
PGSC0003DMT400084902 Potato cytosol 39.31 38.64
PGSC0003DMT400088950 Potato cytosol 45.66 37.09
PGSC0003DMT400092576 Potato cytosol 32.95 36.31
PGSC0003DMT400088552 Potato cytosol 38.15 35.68
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 39.31 34.52
PGSC0003DMT400085031 Potato cytosol 25.43 33.59
PGSC0003DMT400088770 Potato cytosol 30.06 33.33
PGSC0003DMT400097181 Potato cytosol 40.46 32.86
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 41.62 32.43
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 32.95 31.84
PGSC0003DMT400087535 Potato cytosol 49.71 31.62
PGSC0003DMT400097535 Potato mitochondrion 30.64 30.46
PGSC0003DMT400087380 Potato cytosol 29.48 30.36
PGSC0003DMT400092288 Potato cytosol 34.68 28.3
PGSC0003DMT400086264 Potato cytosol 45.66 28.11
PGSC0003DMT400090908 Potato cytosol 34.68 26.32
PGSC0003DMT400086709 Potato cytosol 38.73 26.27
PGSC0003DMT400085022 Potato cytosol 41.04 25.91
PGSC0003DMT400088899 Potato cytosol 32.37 25.23
PGSC0003DMT400089640 Potato mitochondrion 37.57 25.19
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 37.57 25.19
PGSC0003DMT400092830 Potato cytosol 23.12 25.16
PGSC0003DMT400096405 Potato cytosol 23.7 24.7
PGSC0003DMT400089330 Potato cytosol 39.88 24.3
PGSC0003DMT400090073 Potato cytosol 34.1 24.28
PGSC0003DMT400088851 Potato cytosol 33.53 24.27
PGSC0003DMT400093701 Potato cytosol 34.68 24.1
PGSC0003DMT400093491 Potato cytosol 32.37 22.86
PGSC0003DMT400088765 Potato cytosol 38.15 22.37
PGSC0003DMT400090406 Potato cytosol 41.04 21.91
PGSC0003DMT400015411 Potato cytosol 34.68 21.58
PGSC0003DMT400037749 Potato cytosol 35.26 21.55
PGSC0003DMT400086337 Potato cytosol 36.42 21.28
PGSC0003DMT400093314 Potato cytosol 38.15 20.82
PGSC0003DMT400087085 Potato cytosol 34.68 20.13
PGSC0003DMT400095385 Potato cytosol 47.4 19.9
PGSC0003DMT400085869 Potato cytosol 40.46 19.83
PGSC0003DMT400090493 Potato cytosol 42.2 19.78
PGSC0003DMT400002509 Potato mitochondrion 36.42 19.75
KRH46921 Soybean cytosol 31.79 18.77
PGSC0003DMT400026622 Potato cytosol 35.84 18.73
HORVU5Hr1G110100.1 Barley mitochondrion 32.37 18.54
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 31.21 18.43
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 31.21 18.43
PGSC0003DMT400085014 Potato cytosol 23.7 18.3
PGSC0003DMT400083203 Potato cytosol 34.68 18.18
TraesCS5A01G181100.1 Wheat mitochondrion 30.64 18.15
OQU90772 Sorghum plastid 33.53 17.06
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 31.21 16.82
KRH01762 Soybean extracellular, golgi, vacuole 32.37 16.82
Zm00001d034584_P001 Maize plastid 31.79 16.72
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 31.21 16.56
TraesCS5A01G460000.1 Wheat plastid 33.53 16.52
PGSC0003DMT400093361 Potato cytosol 43.93 16.27
TraesCS5B01G469600.1 Wheat cytosol 32.95 16.24
TraesCS5D01G185500.1 Wheat plastid 30.06 16.2
Zm00001d003869_P001 Maize cytosol 30.06 16.15
Zm00001d013021_P001 Maize plastid 31.21 16.02
TraesCS5D01G471100.1 Wheat cytosol 32.37 15.95
EES02950 Sorghum cytosol 33.53 15.76
Os03t0356900-01 Rice extracellular 29.48 15.69
Os07t0211700-00 Rice plastid 31.21 15.56
Os03t0358900-00 Rice cytosol 29.48 15.55
Os03t0810100-01 Rice extracellular 31.79 15.41
Zm00001d040810_P001 Maize cytosol 31.21 15.34
HORVU3Hr1G025950.1 Barley cytosol 30.64 15.32
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 30.64 15.32
Os05t0311801-00 Rice cytosol 30.06 15.25
TraesCS3D01G137000.1 Wheat cytosol, plastid 30.64 15.14
TraesCS1B01G323900.1 Wheat plastid 24.28 15.0
Zm00001d005239_P001 Maize plastid 30.06 14.99
TraesCS3A01G136200.1 Wheat mitochondrion 29.48 14.74
EER96067 Sorghum plastid 30.64 14.64
Zm00001d019171_P001 Maize plastid 30.64 14.56
EES12063 Sorghum cytosol 27.75 14.12
TraesCS1A01G057000.1 Wheat cytosol 31.79 14.1
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 31.21 13.78
PGSC0003DMT400068271 Potato cytosol 30.06 13.72
PGSC0003DMT400091271 Potato cytosol 8.67 11.9
PGSC0003DMT400088320 Potato cytosol 9.25 11.68
PGSC0003DMT400090690 Potato cytosol 8.67 10.79
PGSC0003DMT400096037 Potato cytosol 5.78 9.9
PGSC0003DMT400086959 Potato cytosol 4.62 9.88
PGSC0003DMT400086310 Potato cytosol 6.94 9.84
PGSC0003DMT400094882 Potato cytosol 12.72 9.78
PGSC0003DMT400090318 Potato cytosol 5.78 9.62
PGSC0003DMT400096448 Potato cytosol 5.78 9.62
PGSC0003DMT400091817 Potato cytosol 8.09 9.21
PGSC0003DMT400095880 Potato cytosol 6.94 9.02
PGSC0003DMT400097346 Potato cytosol 6.94 8.96
PGSC0003DMT400087595 Potato cytosol 6.94 8.7
PGSC0003DMT400095744 Potato cytosol 8.09 7.78
PGSC0003DMT400039795 Potato mitochondrion 19.65 7.56
PGSC0003DMT400068836 Potato cytosol 8.67 7.5
PGSC0003DMT400096524 Potato cytosol, nucleus 46.82 7.29
Protein Annotations
EnsemblPlants:PGSC0003DMT400068919EnsemblPlantsGene:PGSC0003DMG400026805Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTKEGG:00908+2.5.1.75PANTHER:PTHR11088PANTHER:PTHR11088:SF49
PFAM:PF01715PGSC:PGSC0003DMG400026805SEG:segUniParc:UPI0002968C65UniProt:M1CJN5MapMan:50.2.5
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400026805]
Coordinates
chr00:-:692429..694926
Molecular Weight (calculated)
19393.3 Da
IEP (calculated)
10.084
GRAVY (calculated)
-0.320
Length
173 amino acids
Sequence
(BLAST)
001: MGKSRLSVDL ATHFRREIIN SDKMQVYKGL DIMTNKITHA EKQGVRHYLL GEIEPDSDFT AEDFCLKSII YIETKIISFI KNNNKFNKKK VVFIGEATGT
101: GKSRLSVDLT THFRGEIINS EGSGWRSSWG DAPDAKVQRN FCGALAGATP QALAQKIPRF SFSFFISKLS NLP
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.