Factsheet for PGSC0003DMT400090690

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400097346	Potato	cytosol	81.3	84.33
PGSC0003DMT400087595	Potato	cytosol	83.45	84.06
PGSC0003DMT400095880	Potato	cytosol	76.26	79.7
PGSC0003DMT400090318	Potato	cytosol	56.83	75.96
PGSC0003DMT400096037	Potato	cytosol	53.24	73.27
PGSC0003DMT400096448	Potato	cytosol	51.8	69.23
PGSC0003DMT400086310	Potato	cytosol	58.99	67.21
PGSC0003DMT400086959	Potato	cytosol	38.13	65.43
PGSC0003DMT400091271	Potato	cytosol	58.99	65.08
PGSC0003DMT400091817	Potato	cytosol	66.91	61.18
Solyc11g063690.1.1	Tomato	cytosol	62.59	54.72
PGSC0003DMT400088320	Potato	cytosol	52.52	53.28
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	64.75	50.28
PGSC0003DMT400095744	Potato	cytosol	61.87	47.78
PGSC0003DMT400068836	Potato	cytosol	67.63	47.0
PGSC0003DMT400094882	Potato	cytosol	71.22	44.0
PGSC0003DMT400088851	Potato	cytosol	65.47	38.08
PGSC0003DMT400088899	Potato	cytosol	60.43	37.84
PGSC0003DMT400097535	Potato	mitochondrion	46.76	37.36
PGSC0003DMT400090073	Potato	cytosol	63.31	36.21
PGSC0003DMT400089640	Potato	mitochondrion	64.75	34.88
PGSC0003DMT400093491	Potato	cytosol	59.71	33.88
PGSC0003DMT400087535	Potato	cytosol	66.19	33.82
PGSC0003DMT400090908	Potato	cytosol	55.4	33.77
PGSC0003DMT400092576	Potato	cytosol	37.41	33.12
PGSC0003DMT400086264	Potato	cytosol	61.15	30.25
PGSC0003DMT400090406	Potato	cytosol	67.63	29.01
PGSC0003DMT400092830	Potato	cytosol	32.37	28.3
PGSC0003DMT400093701	Potato	cytosol	49.64	27.71
PGSC0003DMT400084902	Potato	cytosol	33.81	26.7
PGSC0003DMT400085022	Potato	cytosol	48.92	24.82
PGSC0003DMT400088950	Potato	cytosol	36.69	23.94
PGSC0003DMT400087085	Potato	cytosol	45.32	21.14
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	31.65	19.82
PGSC0003DMT400086337	Potato	cytosol	41.01	19.26
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	34.53	18.6
PGSC0003DMT400095385	Potato	cytosol	53.24	17.96
PGSC0003DMT400097181	Potato	cytosol	26.62	17.37
PGSC0003DMT400088770	Potato	cytosol	19.42	17.31
PGSC0003DMT400085014	Potato	cytosol	27.34	16.96
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	34.53	16.38
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	34.53	16.38
PGSC0003DMT400089330	Potato	cytosol	33.09	16.2
TraesCS5A01G181100.1	Wheat	mitochondrion	33.81	16.1
PGSC0003DMT400002509	Potato	mitochondrion	36.69	15.99
HORVU5Hr1G110100.1	Barley	mitochondrion	33.81	15.56
KRH46921	Soybean	cytosol	30.94	14.68
Os05t0311801-00	Rice	cytosol	35.97	14.66
TraesCS5D01G185500.1	Wheat	plastid	33.81	14.64
Zm00001d034584_P001	Maize	plastid	34.53	14.59
Zm00001d040810_P001	Maize	cytosol	36.69	14.49
OQU90772	Sorghum	plastid	35.25	14.41
Zm00001d013021_P001	Maize	plastid	34.53	14.24
PGSC0003DMT400083203	Potato	cytosol	33.81	14.24
EES02950	Sorghum	cytosol	37.41	14.13
Zm00001d005239_P001	Maize	plastid	35.25	14.12
KRH01762	Soybean	extracellular, golgi, vacuole	33.81	14.11
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	32.37	14.02
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	34.53	13.87
EER96067	Sorghum	plastid	35.97	13.81
Os03t0358900-00	Rice	cytosol	32.37	13.72
TraesCS5A01G460000.1	Wheat	plastid	34.53	13.68
HORVU3Hr1G025950.1	Barley	cytosol	33.81	13.58
PGSC0003DMT400090493	Potato	cytosol	35.97	13.55
Zm00001d019171_P001	Maize	plastid	35.25	13.46
TraesCS5B01G469600.1	Wheat	cytosol	33.81	13.39
TraesCS5D01G471100.1	Wheat	cytosol	33.81	13.39
Zm00001d003869_P001	Maize	cytosol	30.94	13.35
Os03t0810100-01	Rice	extracellular	33.81	13.17
TraesCS3D01G137000.1	Wheat	cytosol, plastid	33.09	13.14
PGSC0003DMT400085869	Potato	cytosol	33.09	13.03
TraesCS3A01G136200.1	Wheat	mitochondrion	32.37	13.01
EES12063	Sorghum	cytosol	31.65	12.94
Os03t0356900-01	Rice	extracellular	30.22	12.92
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	30.22	12.88
PGSC0003DMT400037749	Potato	cytosol	25.9	12.72
PGSC0003DMT400096405	Potato	cytosol	15.11	12.65
Os07t0211700-00	Rice	plastid	30.94	12.39
PGSC0003DMT400015411	Potato	cytosol	23.74	11.87
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	33.09	11.73
PGSC0003DMT400093361	Potato	cytosol	38.13	11.35
TraesCS1A01G057000.1	Wheat	cytosol	31.65	11.28
PGSC0003DMT400088765	Potato	cytosol	23.02	10.85
PGSC0003DMT400068271	Potato	cytosol	24.46	8.97
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	10.79	8.67
PGSC0003DMT400096524	Potato	cytosol, nucleus	66.91	8.37
TraesCS1B01G323900.1	Wheat	plastid	13.67	6.79
PGSC0003DMT400087380	Potato	cytosol	7.91	6.55
PGSC0003DMT400085031	Potato	cytosol	5.76	6.11
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	7.91	5.58
PGSC0003DMT400039795	Potato	mitochondrion	13.67	4.22
PGSC0003DMT400088552	Potato	cytosol	5.04	3.78
PGSC0003DMT400091323	Potato	cytosol	3.6	3.4
PGSC0003DMT400093314	Potato	cytosol	7.19	3.15
PGSC0003DMT400086561	Potato	cytosol	1.44	1.96
PGSC0003DMT400097110	Potato	cytosol	2.16	1.83
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	2.16	1.79
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	1.44	1.77
PGSC0003DMT400088039	Potato	cytosol	1.44	1.42
PGSC0003DMT400091399	Potato	cytosol	1.44	1.4
PGSC0003DMT400087375	Potato	cytosol	0.72	1.2
PGSC0003DMT400086709	Potato	cytosol	2.16	1.18
PGSC0003DMT400092288	Potato	cytosol	1.44	0.94
PGSC0003DMT400097056	Potato	mitochondrion	0.72	0.85
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	0.72	0.75
PGSC0003DMT400026622	Potato	cytosol	1.44	0.6

Protein Annotations

EnsemblPlants:PGSC0003DMT400090690	EnsemblPlantsGene:PGSC0003DMG400040261	Gene3D:1.10.287.890	Gene3D:3.40.50.300	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49
PGSC:PGSC0003DMG400040261	UniParc:UPI0002955B85	UniProt:M1DKY8	MapMan:50.2.5	:	:

Description

Adenylate isopentenyltransferase 5, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400040261]

Coordinates

chr4:-:35226824..35227395

Molecular Weight (calculated)

16172.9 Da

IEP (calculated)

9.197

GRAVY (calculated)

-0.319

Length

139 amino acids

Sequence
(BLAST)

001: MRIDQVVNAG LMDKVRQIFI PDADYTKGIG RSIGVPGMDR YLRKEINIDE DDESKKMLLQ SSTANIKCNT RLLICHQLDK IQRLINEKMW LVHHIIATGV
101: FKGDRKEVVD KAWRNTILQP FLDIVKRFLK SDDHNIIIE

Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.