Factsheet for GSMUA_Achr5P07950_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, peroxisome, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P09080_001	Banana	extracellular	50.0	50.0
GSMUA_AchrUn_...	Banana	cytosol	42.52	49.65
TraesCS5A01G181100.1	Wheat	mitochondrion	42.22	48.29
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	41.62	47.44
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	41.62	47.44
Os03t0358900-00	Rice	cytosol	44.31	45.12
TraesCS5D01G185500.1	Wheat	plastid	41.62	43.3
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	41.32	42.99
Zm00001d003869_P001	Maize	cytosol	41.32	42.86
Os03t0356900-01	Rice	extracellular	41.02	42.15
GSMUA_Achr1P12830_001	Banana	cytosol	15.27	42.15
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	40.42	41.41
GSMUA_Achr2P06730_001	Banana	cytosol	12.57	40.38
EES12063	Sorghum	cytosol	40.42	39.71
GSMUA_Achr3P29480_001	Banana	cytosol	29.94	38.31
GSMUA_AchrUn_...	Banana	mitochondrion	38.02	36.39
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	42.52	36.22
TraesCS1A01G057000.1	Wheat	cytosol	41.02	35.13
GSMUA_Achr4P06810_001	Banana	cytosol	31.44	34.31
GSMUA_Achr1P23110_001	Banana	cytosol	31.74	34.3
GSMUA_Achr11P...	Banana	cytosol	33.83	26.9
GSMUA_Achr9P21400_001	Banana	cytosol	19.16	23.1
GSMUA_Achr1P06960_001	Banana	cytosol	7.78	10.44

Protein Annotations

EnsemblPlants:GSMUA_Achr5P07950_001	EnsemblPlants:GSMUA_Achr5T07950_001	EnsemblPlantsGene:GSMUA_Achr5G07950_001	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase
KEGG:00908+2.5.1.75	ncoils:Coil	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	PFAM:PF01715	SUPFAM:SSF52540
UniParc:UPI000296CAC8	UniProt:M0SWM4	MapMan:11.4.1.1	:	:	:

Description

Adenylate isopentenyltransferase 5, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G07950_001]

Coordinates

chr5:-:5684267..5685271

Molecular Weight (calculated)

37000.8 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.277

Length

334 amino acids

Sequence
(BLAST)

001: MDSSSLLHSK EKVVFVLGVT GSGKSKLAIA LAKCFNGEVV NSDKMQVYDG IPVITNKVTE EEKEDVPHHL IGGVNPEGNF TAADFRREAT RLVEAILARG
101: RLPIIAGGSN SYVKKLVEGD GCGFRSRYDC CFVWVDVDLT VLRDFVYARV DKMVELGLVE EARSMFKPDG DYSTGIRLSI GVREMHLYFQ SEEGADEETK
201: ARLLEASLDK VKANTFDLTC GQLQKIQGFR VMGWDLHRVD STEFFRQRGQ GAEEELWKEV VWAPSAEIVR SFLATENKNE TDVVAEVAPV KVEDETVCAE
301: KTVEKESQVA AKGTESEERR VSSYTGLSSA MTCA

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.