Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0068g01930.t01 | Wine grape | nucleus | 57.45 | 64.03 |
| PGSC0003DMT400052062 | Potato | cytosol | 54.26 | 60.24 |
| Os11t0498400-01 | Rice | cytosol | 65.25 | 60.13 |
| KRH06937 | Soybean | cytosol | 53.9 | 59.84 |
| Solyc02g094170.2.1 | Tomato | cytosol | 53.55 | 59.45 |
| TraesCS3A01G093300.1 | Wheat | nucleus | 65.96 | 59.05 |
| TraesCS3B01G109000.1 | Wheat | nucleus | 65.6 | 58.92 |
| TraesCS3D01G093600.1 | Wheat | nucleus | 65.6 | 58.73 |
| Zm00001d007339_P001 | Maize | nucleus | 61.7 | 58.0 |
| Bra006240.1-P | Field mustard | nucleus | 52.13 | 56.76 |
| CDX78562 | Canola | nucleus | 52.13 | 56.76 |
| CDX70544 | Canola | nucleus | 52.13 | 56.32 |
| AT5G14140.1 | Thale cress | nucleus | 52.13 | 55.68 |
| OQU83468 | Sorghum | plastid | 63.83 | 45.92 |
| KRG94534 | Soybean | nucleus | 10.64 | 36.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P16600_001 | EnsemblPlants:GSMUA_Achr6T16600_001 | EnsemblPlantsGene:GSMUA_Achr6G16600_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR21354 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| UniParc:UPI000295F2C5 | UniProt:M0T7K8 | MapMan:35.2 | : | : | : |
Description
Putative Zinc finger protein 511 [Source:GMGC_GENE;Acc:GSMUA_Achr6G16600_001]
Coordinates
chr6:-:11049111..11053947
Molecular Weight (calculated)
32324.2 Da
IEP (calculated)
9.012
GRAVY (calculated)
-0.770
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSGGEELG LGSRWWIASR RRLMPDDPFF SAGNIERELL AKQVALDLTE DERYQLQKME VANTEPVFCP IVGCAARLDC LEDFEDHYHA RHTASCSVCS
101: RVFPTSRLLS IHISEAHDSF FQAKVARGFL MYECLVEGCG VKLKSYKSRQ QHLVDKHKFP TTFEFYKRAH PSKHQRQKHL RRQASYPKEA SNNTDMDVDR
201: KSSKQIYQKY RPKKASLKEG KETEMEVEER MDDLVSAVSK LSTSDSSPSS ISFGHRNARG FAFVPRSIHH NRKQTSQSEA KG
101: RVFPTSRLLS IHISEAHDSF FQAKVARGFL MYECLVEGCG VKLKSYKSRQ QHLVDKHKFP TTFEFYKRAH PSKHQRQKHL RRQASYPKEA SNNTDMDVDR
201: KSSKQIYQKY RPKKASLKEG KETEMEVEER MDDLVSAVSK LSTSDSSPSS ISFGHRNARG FAFVPRSIHH NRKQTSQSEA KG
001: MATGMAVDTV GELGFPYWNP IRRRFPPDSP FFASGNVERE LLAKQVTLDF TEDEINHLHK FVEIETRRIS CPIVGCPERL KSLDHFEDHY NARHTASCSV
101: CSRVYPTSRL LSIHISEAHD SFFQAKVSRG YDMYECLVEG CGLKFKTYKA RHRHLIDKHK FPTTFEFFKK TQLSKKRREK LQRQHVSKLK HEEDKEAASS
201: DAMEVEDKGS LDGLVSALSS LTTSDTTPSN VSFGRRHGRG LTFVPRSVHR EKRTESSSAP GPTN
101: CSRVYPTSRL LSIHISEAHD SFFQAKVSRG YDMYECLVEG CGLKFKTYKA RHRHLIDKHK FPTTFEFFKK TQLSKKRREK LQRQHVSKLK HEEDKEAASS
201: DAMEVEDKGS LDGLVSALSS LTTSDTTPSN VSFGRRHGRG LTFVPRSVHR EKRTESSSAP GPTN
Arabidopsis Description
Nucleic acid binding / zinc ion binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WRF4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.