Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G109000.1 | Wheat | nucleus | 76.33 | 72.93 |
| TraesCS3D01G093600.1 | Wheat | nucleus | 76.0 | 72.38 |
| Os11t0498400-01 | Rice | cytosol | 73.67 | 72.22 |
| TraesCS3A01G093300.1 | Wheat | nucleus | 75.67 | 72.06 |
| OQU83468 | Sorghum | plastid | 91.33 | 69.9 |
| GSMUA_Achr6P16600_001 | Banana | cytosol | 58.0 | 61.7 |
| VIT_14s0068g01930.t01 | Wine grape | nucleus | 50.0 | 59.29 |
| KRH06937 | Soybean | cytosol | 49.67 | 58.66 |
| PGSC0003DMT400052062 | Potato | cytosol | 48.33 | 57.09 |
| Solyc02g094170.2.1 | Tomato | cytosol | 47.67 | 56.3 |
| CDX70544 | Canola | nucleus | 45.33 | 52.11 |
| Bra006240.1-P | Field mustard | nucleus | 44.33 | 51.35 |
| CDX78562 | Canola | nucleus | 44.33 | 51.35 |
| AT5G14140.1 | Thale cress | nucleus | 44.67 | 50.76 |
| KRG94534 | Soybean | nucleus | 12.0 | 43.37 |
Protein Annotations
| EMBL:EU959494 | EnsemblPlants:Zm00001d007339_P001 | EnsemblPlants:Zm00001d007339_T001 | EnsemblPlantsGene:Zm00001d007339 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR21354 | ProteinID:ONM26575.1 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | UniParc:UPI000182BE3B | UniProt:B6T3C9 | MapMan:35.2 |
Description
Zinc finger protein 511
Coordinates
chr2:+:229145502..229148452
Molecular Weight (calculated)
34214.1 Da
IEP (calculated)
8.040
GRAVY (calculated)
-0.927
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKKPDDAME EEAAAAPGPE IGFWLAARRR LAPEDPFFAA GDLERELLAK HLALDLSEDD RNQLEKMEVA STCTVFCPIA GCGAHLDCLE EFEDHYVTRH
101: TASCSVCSRV YPTSRLLSIH VSETHDSYFQ AKVARGFPMY ECLVEGCGMK LKSYKSRQQH LIDKHQFPKS FEFFKKARDS QRQRQKSQRR QTAHKGEETR
201: DNSMDVDGKG ARQTNRRYRL KQHDHSEPKE NKQQHKEAQE DEMEVEQKID ELTSAVSRLS TADSTPSSVT FGHRRSRGLT FVPRSIRQNK QAALPAGSNK
101: TASCSVCSRV YPTSRLLSIH VSETHDSYFQ AKVARGFPMY ECLVEGCGMK LKSYKSRQQH LIDKHQFPKS FEFFKKARDS QRQRQKSQRR QTAHKGEETR
201: DNSMDVDGKG ARQTNRRYRL KQHDHSEPKE NKQQHKEAQE DEMEVEQKID ELTSAVSRLS TADSTPSSVT FGHRRSRGLT FVPRSIRQNK QAALPAGSNK
001: MATGMAVDTV GELGFPYWNP IRRRFPPDSP FFASGNVERE LLAKQVTLDF TEDEINHLHK FVEIETRRIS CPIVGCPERL KSLDHFEDHY NARHTASCSV
101: CSRVYPTSRL LSIHISEAHD SFFQAKVSRG YDMYECLVEG CGLKFKTYKA RHRHLIDKHK FPTTFEFFKK TQLSKKRREK LQRQHVSKLK HEEDKEAASS
201: DAMEVEDKGS LDGLVSALSS LTTSDTTPSN VSFGRRHGRG LTFVPRSVHR EKRTESSSAP GPTN
101: CSRVYPTSRL LSIHISEAHD SFFQAKVSRG YDMYECLVEG CGLKFKTYKA RHRHLIDKHK FPTTFEFFKK TQLSKKRREK LQRQHVSKLK HEEDKEAASS
201: DAMEVEDKGS LDGLVSALSS LTTSDTTPSN VSFGRRHGRG LTFVPRSVHR EKRTESSSAP GPTN
Arabidopsis Description
Nucleic acid binding / zinc ion binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WRF4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.