CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06937	Soybean	cytosol	66.27	21.65
PGSC0003DMT400052062	Potato	cytosol	50.6	16.54
VIT_14s0068g01930.t01	Wine grape	nucleus	48.19	15.81
Solyc02g094170.2.1	Tomato	cytosol	48.19	15.75
CDX70544	Canola	nucleus	49.4	15.71
Bra006240.1-P	Field mustard	nucleus	48.19	15.44
CDX78562	Canola	nucleus	48.19	15.44
AT5G14140.1	Thale cress	nucleus	46.99	14.77
Zm00001d007339_P001	Maize	nucleus	43.37	12.0
Os11t0498400-01	Rice	cytosol	40.96	11.11
TraesCS3B01G109000.1	Wheat	nucleus	40.96	10.83
GSMUA_Achr6P16600_001	Banana	cytosol	36.14	10.64
TraesCS3D01G093600.1	Wheat	nucleus	39.76	10.48
TraesCS3A01G093300.1	Wheat	nucleus	38.55	10.16
OQU83468	Sorghum	plastid	40.96	8.67

Protein Annotations

EMBL:ACUP02011974	EnsemblPlants:KRG94534	EnsemblPlantsGene:GLYMA_19G091700	ProteinID:KRG94534	ProteinID:KRG94534.1	UniParc:UPI00023D9CA1
UniProt:A0A0R0EK26	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:32426759..32427493

Molecular Weight (calculated)

9603.6 Da

IEP (calculated)

10.479

GRAVY (calculated)

-0.671

Length

83 amino acids

Sequence
(BLAST)

1: MAMEVEQNQN HQLGFPFWKP LRHRFGPESP FFAPGNLERE LLAKQKKSNS LRNGCKRKKE GTDPYIVGFI LFTIREIQIN AGT

Best Arabidopsis Sequence Match ( AT5G14140.1 )
(BLAST)

001: MATGMAVDTV GELGFPYWNP IRRRFPPDSP FFASGNVERE LLAKQVTLDF TEDEINHLHK FVEIETRRIS CPIVGCPERL KSLDHFEDHY NARHTASCSV
101: CSRVYPTSRL LSIHISEAHD SFFQAKVSRG YDMYECLVEG CGLKFKTYKA RHRHLIDKHK FPTTFEFFKK TQLSKKRREK LQRQHVSKLK HEEDKEAASS
201: DAMEVEDKGS LDGLVSALSS LTTSDTTPSN VSFGRRHGRG LTFVPRSVHR EKRTESSSAP GPTN

Arabidopsis Description

Nucleic acid binding / zinc ion binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WRF4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.