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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G120600.1 Wheat plastid 90.82 90.46
TraesCS1A01G119700.1 Wheat plastid 89.88 89.52
TraesCS1B01G139100.1 Wheat plastid 88.39 88.39
Os05t0180400-01 Rice plastid 60.19 60.03
Zm00001d037712_P001 Maize plastid 60.19 59.31
KXG21461 Sorghum plastid 60.05 59.18
HORVU3Hr1G021660.1 Barley plastid 51.69 46.76
GSMUA_Achr5P06220_001 Banana plastid 38.33 35.02
PGSC0003DMT400006590 Potato nucleus 29.42 32.25
VIT_09s0002g04750.t01 Wine grape nucleus, plastid 31.17 32.13
KRH31259 Soybean endoplasmic reticulum, golgi 18.35 31.85
Solyc03g120230.2.1 Tomato plastid 30.36 31.38
KRH30491 Soybean plastid 30.23 30.64
KRH25191 Soybean plastid 30.23 30.35
AT3G16000.1 Thale cress plastid 29.42 30.03
Bra027196.1-P Field mustard plastid 29.01 29.86
CDY30128 Canola plastid 28.88 29.72
CDX82420 Canola plastid 27.94 29.45
CDX97716 Canola plastid 28.61 29.44
CDX75863 Canola plastid 28.21 29.31
CDY21894 Canola golgi 23.62 29.07
Bra001618.1-P Field mustard plastid 27.67 28.35
Bra019290.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.77 27.87
CDY10951 Canola endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 14.3 26.63
Bra021153.1-P Field mustard nucleus 12.28 22.14
CDY20172 Canola nucleus 12.28 22.14
Protein Annotations
EMBL:AK358323EnsemblPlants:HORVU1Hr1G026750.1EnsemblPlantsGene:HORVU1Hr1G026750ncoils:CoilPANTHER:PTHR13140PANTHER:PTHR13140:SF659
SEG:segUniParc:UPI00020053DBUniProt:F2D366MapMan:35.1::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D366]
Coordinates
chrchr1H:-:136530041..136535375
Molecular Weight (calculated)
82816.8 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.596
Length
741 amino acids
Sequence
(BLAST)
001: MGYHHLLVVS PPAQPPPRRL SLLSRSPRGA VTAAASPDAA RSLSVVAASA ATRRRAVLLV GISVLPLLRL RDAAAAAQPL AADLVTDKMG IQTSEEMQLE
101: ETRAKPPQPE VKRPSPGNPL ANLLNAIAVI ASGLLAGLLG TTQREKKALQ STISSMEIKL AEDEAAMSVL RENYEKRLLD EQAAQKKQAR MFQDEEASLL
201: DQLASTTRTV KKLNGEVMKE EELVGQLKHG IHDLEMSIAQ AEEDKHAFEE NLRDKLETVD ILHGKVNLLS QDVNDKEEHI TELSSSLSTK EGDYQNLHLM
301: FNQTKGSLEH ANSRMEQLEK YVYAAKNDIK SKISSIDSLN EDVQTLYSAK SDAEEKINEL MKQYAELDAA SEMRASRDLE LLSNKDDQLN QLEEQLSTAL
401: SDSIEDRIII AELNSELEAN RTMLVNEVEA RKKMSDLIQS TEDALKESRN ELFKLSEELN EVNISNHYLR TQISEFTNES NEVKEALTNK VEEAESVSKA
501: LSDEVASLKE ILQKTQEDLE VTSNQLVSIT EVHDELNKEL LDAYKKLESA TDELVRERQI NSILNRELEA LVEQSQVESE ARRALHVDLD EATVSLNEVN
601: ESTLFLSNKL DSTVSRICAI KEEKEVLSAA LLEQKKRTAE AQKNMVDAQH LIKRLGMERE NSEIRNKKLE EELATAKGEM LYLRRQITAS GSQNTDVMEA
701: SPTPNFSQPL EDRVPNTSST DAVPPRSAKK IYRRRKDRPS T
Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)
001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS
Arabidopsis Description
MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.