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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001618.1-P Field mustard plastid 96.3 93.64
CDX75863 Canola plastid 88.9 87.66
CDY10951 Canola endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 48.22 85.18
CDX97716 Canola plastid 75.11 73.33
CDY30128 Canola plastid 73.54 71.81
AT3G16000.1 Thale cress plastid 70.55 68.32
CDY21894 Canola golgi 54.62 63.79
CDY20172 Canola nucleus 25.75 44.04
VIT_09s0002g04750.t01 Wine grape nucleus, plastid 43.67 42.7
KRH30491 Soybean plastid 41.82 40.22
PGSC0003DMT400006590 Potato nucleus 37.84 39.35
Solyc03g120230.2.1 Tomato plastid 39.83 39.05
KRH25191 Soybean plastid 40.97 39.02
KRH31259 Soybean endoplasmic reticulum, golgi 23.47 38.64
GSMUA_Achr5P06220_001 Banana plastid 37.98 32.92
Os01t0180300-01 Rice plastid 34.14 31.33
Zm00001d039598_P001 Maize plastid 34.57 31.23
OQU86191 Sorghum plastid 35.28 29.49
TraesCS1D01G120600.1 Wheat plastid 30.44 28.76
KXG21461 Sorghum plastid 30.58 28.59
Zm00001d037712_P001 Maize plastid 30.44 28.46
TraesCS1B01G139100.1 Wheat plastid 29.87 28.34
TraesCS1A01G119700.1 Wheat plastid 29.73 28.09
HORVU1Hr1G026750.1 Barley plastid 29.45 27.94
Os05t0180400-01 Rice plastid 29.45 27.86
HORVU3Hr1G021660.1 Barley plastid 31.44 26.98
TraesCS3D01G119600.1 Wheat plastid 32.01 26.72
TraesCS3A01G117800.2 Wheat plastid 31.44 26.31
TraesCS3B01G137100.2 Wheat plastid 31.44 26.31
Protein Annotations
EnsemblPlants:CDX82420EnsemblPlantsGene:GSBRNA2T00137549001ncoils:CoilPANTHER:PTHR13140PANTHER:PTHR13140:SF659ProteinID:CDX82420
ProteinID:CDX82420.1SEG:segUniParc:UPI0004EEA0ADMapMan:35.1::
Description
BnaA03g34010D
Coordinates
chrLK031828:+:1136718..1139282
Molecular Weight (calculated)
79355.7 Da
IEP (calculated)
5.088
GRAVY (calculated)
-0.833
Length
703 amino acids
Sequence
(BLAST)
001: MGGFLIGGTC SSPSPPLHSS RFLPSPSPPS QFLLLCSNNA AKSKRRRPPS ASLRRQDANN DVKRRAFVLV GISVLPFLKL QSPALADERD DNEIKTSKLN
101: QESEVAVSEG TTSSPNTFLS LLNGLGIFSS GVLGALYALA RKDTKAAQET IDSLKNQLKE RERALVLMEK DFEARIKREE EEWNKERKKA EEERFSLINQ
201: LNSAKEVAAG LGKELSSEKK ISEELRAQVG NLQSNLSKAG EDKRALETEL KEKLDLIEGL EDRINLLSLE LKDKKEEVQT ISTSLAEKEE ELKKLNSAYT
301: QTSSDLAEAK LQIKQLKEEV TRTQSEIDSK NSAIEELNTR ITTLVAEKEG YIKKLDDATK DYNDLKLTSE TRAAADADVI RSREEEIQKI NEKLDHAVKD
401: VNESRDKVAD LTEKYEDAKR MLEIELASVQ NLRHELEGTK ITLQASRERV SDLEKMLDES RGLCSKFESE VSKVSEEFDK AKKRYEENLA DERRNGEVLA
501: SELAVEKDHV KKARDEIEEL RREVEEASAK NQSLQKELVE VYKKGEATNK ELKEEKETVS ALEKEVKVME KQMLMDTEAM KALETDLEEA VKSLDEMNKN
601: TATLSRELEK VNTHVSSLED EREVLQRSLE EAKKASKEAK ENVEDAHIVV MSLGKEREVL EKKAKKLEED LGSAKGEILR MRSQQQDSIK AKVVRRRKSS
701: TSS
Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)
001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS
Arabidopsis Description
MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.