CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039598_P001	Maize	plastid	80.26	86.76
Os01t0180300-01	Rice	plastid	60.52	66.45
TraesCS3D01G119600.1	Wheat	plastid	63.5	63.42
TraesCS3A01G117800.2	Wheat	plastid	62.78	62.86
TraesCS3B01G137100.2	Wheat	plastid	62.19	62.26
HORVU3Hr1G021660.1	Barley	plastid	58.98	60.56
KXG21461	Sorghum	plastid	42.09	47.07
GSMUA_Achr5P06220_001	Banana	plastid	40.67	42.17
CDY30128	Canola	plastid	31.03	36.25
Bra027196.1-P	Field mustard	plastid	30.68	35.83
AT3G16000.1	Thale cress	plastid	30.8	35.67
CDX82420	Canola	plastid	29.49	35.28
VIT_09s0002g04750.t01	Wine grape	nucleus, plastid	30.08	35.19
PGSC0003DMT400006590	Potato	nucleus	28.18	35.06
CDX97716	Canola	plastid	29.96	35.0
Bra001618.1-P	Field mustard	plastid	30.08	34.99
Bra019290.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.22	34.97
CDX75863	Canola	plastid	29.25	34.5
CDY10951	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	16.17	34.17
KRH31259	Soybean	endoplasmic reticulum, golgi	17.24	33.96
Solyc03g120230.2.1	Tomato	plastid	28.89	33.89
KRH30491	Soybean	plastid	29.25	33.65
CDY21894	Canola	golgi	24.02	33.55
KRH25191	Soybean	plastid	29.37	33.47
Bra021153.1-P	Field mustard	nucleus	12.6	25.79
CDY20172	Canola	nucleus	12.6	25.79

Protein Annotations

EnsemblPlants:OQU86191	EnsemblPlantsGene:SORBI_3003G042100	ncoils:Coil	PANTHER:PTHR13140	PANTHER:PTHR13140:SF659	ProteinID:OQU86191
ProteinID:OQU86191.1	ProteinID:OQU86194.1	SEG:seg	SUPFAM:SSF57997	UniParc:UPI0009DC8822	UniProt:A0A1W0VVQ9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:3906856..3915647

Molecular Weight (calculated)

92858.2 Da

IEP (calculated)

4.981

GRAVY (calculated)

-0.683

Length

841 amino acids

Sequence
(BLAST)

001: MGYLVISPSQ SPSPPHAFQY ASSSSSSSSS SSSSSSSSSS GATACRRRAR RGGAFVVASA ASPLDGGPSP AAAAAAAADA YVLARRVVLL GASAIPFVSL
101: REAAAAPAPV DIVKVYGMSL FEGFVRRKGI DAPRVNREAE NCYETFKIGR NSIICRPKED KIDETKNVPQ FEGTKGMAKP EKTQPEGTQV ETNTPEARQR
201: ESSLQLVQEQ PPENPLVGFL GTVGVAASGV LGGLYGTSLQ EKKALQSIIS STESKLAENE AALSLMRENY EKRLLEQQAA QKKQSMKFQQ QEVSLSGQLA
301: SATKTLTSLS EEFRKEKKLA EELRDEIQRL ESSITQAGID KDVLKTKLEE KLGEIDVLQE KISLLSQEID DKAKHIRELS ASLSSKEVDY QKLTAFTNET
401: KRSLELANSR VQQLEEELNT TKNALASKIS SIDSLNARLE TLNSEKEEAD KKINELIQEY TDLKAASETR ANHDSKLLSE RDDEIKQLEE KLSFALTDSS
501: KYQETIVELN KELDATKMML ENELKAMETL KDSIRSSEEA LKTSRTEVSK LSKELEEAKE LNEVLVSQIS KLQEESNEMQ VDLTNKLGEA ESLSKALSED
601: LASVKEMVQK GQEELEATSN ELASIVEARD NLKKELLDVY KNLESTTHEL VEERKIVTTL NRELEVLAKQ LQVDSEARKA LEADLDEATK SLDEMNHSAL
701: LLSKELEGTH SRNDTLEAEK EMLSKALSEQ TKITTEAKEN TEDAQNMITR LQTEKESFEL RSRHLEEELA LAKGEILRLR RQISTNSSQK PRAPPRARGP
801: PETNETLKEQ PVNDHNQKSS GVVAGTPQPV KRTVRRRKGS A

Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)

001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS

Arabidopsis Description

MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.