CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30491	Soybean	plastid	88.21	89.06
KRH31259	Soybean	endoplasmic reticulum, golgi	46.21	79.86
VIT_09s0002g04750.t01	Wine grape	nucleus, plastid	45.94	47.15
PGSC0003DMT400006590	Potato	nucleus	40.38	44.08
AT3G16000.1	Thale cress	plastid	42.01	42.7
Solyc03g120230.2.1	Tomato	plastid	41.06	42.26
Bra019290.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.73	41.8
Bra001618.1-P	Field mustard	plastid	40.51	41.36
CDX82420	Canola	plastid	39.02	40.97
CDX75863	Canola	plastid	39.43	40.81
Bra027196.1-P	Field mustard	plastid	39.7	40.69
CDY30128	Canola	plastid	39.43	40.42
CDX97716	Canola	plastid	39.3	40.28
CDY10951	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	21.68	40.2
CDY21894	Canola	golgi	31.57	38.7
GSMUA_Achr5P06220_001	Banana	plastid	37.4	34.03
Os01t0180300-01	Rice	plastid	33.74	32.51
Zm00001d039598_P001	Maize	plastid	33.33	31.62
CDY20172	Canola	nucleus	16.94	30.41
Bra021153.1-P	Field mustard	nucleus	16.94	30.41
TraesCS1D01G120600.1	Wheat	plastid	30.62	30.38
TraesCS1B01G139100.1	Wheat	plastid	30.35	30.23
HORVU1Hr1G026750.1	Barley	plastid	30.35	30.23
KXG21461	Sorghum	plastid	30.76	30.19
Zm00001d037712_P001	Maize	plastid	30.76	30.19
TraesCS1A01G119700.1	Wheat	plastid	30.08	29.84
Os05t0180400-01	Rice	plastid	29.67	29.48
OQU86191	Sorghum	plastid	33.47	29.37
HORVU3Hr1G021660.1	Barley	plastid	32.11	28.94
TraesCS3D01G119600.1	Wheat	plastid	32.79	28.74
TraesCS3A01G117800.2	Wheat	plastid	32.25	28.33
TraesCS3B01G137100.2	Wheat	plastid	32.11	28.21

Protein Annotations

EMBL:ACUP02007221	EnsemblPlants:KRH25191	EnsemblPlantsGene:GLYMA_12G087100	EntrezGene:100812554	ncoils:Coil	PANTHER:PTHR13140
PANTHER:PTHR13140:SF659	ProteinID:KRH25191	ProteinID:KRH25191.1	SEG:seg	SUPFAM:SSF57997	UniParc:UPI000233C460
UniProt:I1LRE3	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:7057710..7061521

Molecular Weight (calculated)

82796.9 Da

IEP (calculated)

5.083

GRAVY (calculated)

-0.761

Length

738 amino acids

Sequence
(BLAST)

001: MAASSTFCLL HSPLYQFPSS SSSSSSSSSS SGLRKLRAST TSSCLGQQDK DPVCNKRTIL LSSIALLPFR RLKRAPALES PPPPPTPTEE TEVKTQEDNQ
101: EAEKASEVDQ PSNSFLTLLN GIGIFSSGVL GALYTLAQKE KSTAVATIET MSSKLKDKEE LIVSLKKNYE LKLLNKQEEQ AKLVEKAKEE QLALINQLNS
201: ANSTIKRLGQ ELKSERSLIE DLKLQIGQLK TELSKTDTDK KDLENNLKEK IDSIGVLQER INLLSVDLKG KEDVVQNLNS FLAEKELQLK SLNSTYEQTK
301: DDLSNVQLQI QGLKDELLKS QEELEAKDSL VIELNSRVSS LTLENNDFRS KCDVIEKEYN VLKLSAEKKA ALDSKVLREK DEELHQLKDQ FELALGEASK
401: NQTVIVDLSQ ERDDLKEALE NESSKVNHLK HELQVTQENL AKSRNEFAEL ENFLTESIKL RKELELKVSK LLSELTEVKE SLQRSLEDGK HEAQMLASEL
501: TTAKEHLKES QAELQGVSKE LTTALEKNDS LQKELIDVYK KAETTAEDLK EQKQLVASLN KDLQALEQQV SKDKESRKPL ERDLEEATKS LEEMNRNAVI
601: LSGELQRANF LVSSLEKEKE VLTKSLTDQR NACKEAQDNI EDAHNLIMKL GKERENLGKK GKKFEEELAS AKGEILRLKS RINSSEVAVN NDQVQKDGGE
701: NKVNSSEVAV NEQQKDEGEN KVTVSARKTV RRRKANPQ

Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)

001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS

Arabidopsis Description

MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.