CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, secretory
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019290.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.94	96.72
CDX75863	Canola	plastid	87.44	48.81
CDX82420	Canola	plastid	85.18	48.22
CDX97716	Canola	plastid	73.62	40.69
CDY20172	Canola	nucleus	40.7	39.42
CDY30128	Canola	plastid	71.11	39.31
AT3G16000.1	Thale cress	plastid	69.1	37.88
CDY21894	Canola	golgi	55.28	36.54
KRH31259	Soybean	endoplasmic reticulum, golgi	35.93	33.49
VIT_09s0002g04750.t01	Wine grape	nucleus, plastid	45.48	25.17
KRH30491	Soybean	plastid	41.46	22.57
PGSC0003DMT400006590	Potato	nucleus	37.94	22.34
KRH25191	Soybean	plastid	40.2	21.68
Solyc03g120230.2.1	Tomato	plastid	38.69	21.48
GSMUA_Achr5P06220_001	Banana	plastid	36.18	17.76
Os01t0180300-01	Rice	plastid	33.92	17.62
Zm00001d039598_P001	Maize	plastid	34.17	17.48
OQU86191	Sorghum	plastid	34.17	16.17
KXG21461	Sorghum	plastid	29.4	15.56
Os05t0180400-01	Rice	plastid	28.64	15.34
Zm00001d037712_P001	Maize	plastid	28.89	15.29
HORVU3Hr1G021660.1	Barley	plastid	31.16	15.14
TraesCS3D01G119600.1	Wheat	plastid	31.16	14.73
TraesCS3A01G117800.2	Wheat	plastid	30.9	14.64
TraesCS3B01G137100.2	Wheat	plastid	30.9	14.64
TraesCS1D01G120600.1	Wheat	plastid	27.14	14.52
TraesCS1B01G139100.1	Wheat	plastid	26.88	14.44
HORVU1Hr1G026750.1	Barley	plastid	26.63	14.3
TraesCS1A01G119700.1	Wheat	plastid	26.63	14.25

Protein Annotations

EnsemblPlants:CDY10951	EnsemblPlantsGene:GSBRNA2T00048882001	ncoils:Coil	PANTHER:PTHR13140	PANTHER:PTHR13140:SF659	ProteinID:CDY10951
ProteinID:CDY10951.1	SEG:seg	SUPFAM:SSF90257	UniParc:UPI0004EDC19A	UniProt:A0A078FC69	MapMan:35.1

Description

BnaA03g46100DBnaA03g46100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC69]

Coordinates

chrLK032008:+:262284..263973

Molecular Weight (calculated)

45837.3 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.918

Length

398 amino acids

Sequence
(BLAST)

001: MCFFNYILMS DFLLNLEEGY IKKLDDATKD LKLTSETREA ADADVIRSKE EEIQKINEKM DHAVKDVNES KDKVADLTEK YEDAKRMLEI ELASVHNLRH
101: ELEGTKRTLQ ASRERVSDLE KMLDESRALC SKFESEVSKV HEEFDKAKKR YEENLADERR NGEVLASELA VEKDHVKKAR DEIEELRREV EEASAKNQSL
201: QKELVEVYKR GEATNKELKE EKETVSALEK EVKAMEKQML MDREAMKALE TDLEEAVKSL DEMNKNTATL SRELEKVNTH ASSLEDEREV LQGSLEEARN
301: ASKEAKENVE DAHIVVMSLG KEREVLEKKV KKLEEDLGSA KGEILRMRSQ QQDSIKAVNG SDDEEKSDDK VAVKKVVRRR KSSTKDCIRL FMSKIMIS

Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)

001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS

Arabidopsis Description

MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.