Factsheet for Zm00001d037712_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21461	Sorghum	plastid	86.57	86.57
TraesCS1D01G120600.1	Wheat	plastid	61.04	61.69
Os05t0180400-01	Rice	plastid	60.77	61.51
TraesCS1B01G139100.1	Wheat	plastid	60.51	61.4
TraesCS1A01G119700.1	Wheat	plastid	60.64	61.29
HORVU1Hr1G026750.1	Barley	plastid	59.31	60.19
Zm00001d039598_P001	Maize	plastid	49.34	47.69
GSMUA_Achr5P06220_001	Banana	plastid	38.7	35.88
PGSC0003DMT400006590	Potato	nucleus	31.12	34.62
Solyc03g120230.2.1	Tomato	plastid	31.65	33.19
VIT_09s0002g04750.t01	Wine grape	nucleus, plastid	31.65	33.1
KRH31259	Soybean	endoplasmic reticulum, golgi	18.22	32.08
KRH30491	Soybean	plastid	30.59	31.46
CDY30128	Canola	plastid	30.05	31.39
Bra027196.1-P	Field mustard	plastid	30.05	31.39
AT3G16000.1	Thale cress	plastid	29.92	30.99
Bra019290.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.03	30.87
KRH25191	Soybean	plastid	30.19	30.76
CDX97716	Canola	plastid	29.39	30.69
CDX82420	Canola	plastid	28.46	30.44
Bra001618.1-P	Field mustard	plastid	28.46	29.6
CDX75863	Canola	plastid	28.06	29.59
CDY21894	Canola	golgi	23.67	29.57
CDY10951	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	15.29	28.89
CDY20172	Canola	nucleus	12.23	22.38
Bra021153.1-P	Field mustard	nucleus	12.23	22.38

Protein Annotations

EnsemblPlants:Zm00001d037712_P001	EnsemblPlants:Zm00001d037712_T001	EnsemblPlantsGene:Zm00001d037712	EntrezGene:103630123	ncoils:Coil	PANTHER:PTHR13140
PANTHER:PTHR13140:SF659	ProteinID:AQK84643.1	SEG:seg	UniParc:UPI0002212C37	UniProt:A0A1D6M002	MapMan:35.1

Description

MAR-binding filament-like protein 1

Coordinates

chr6:-:134848645..134857406

Molecular Weight (calculated)

83698.9 Da

IEP (calculated)

5.063

GRAVY (calculated)

-0.626

Length

752 amino acids

Sequence
(BLAST)

001: MGYHHLLLSP SVAQPPRPAL LPPPRGRRGS GVGRATAVFA SASSTARSPA ADDATRRRAV LLVGVSVLPL LRLRDAAAAA ARAQLSSVDL VTDRTDIQKA
101: DVTQPEEPWE ELHQPDEQGQ PARNPLAGLL NAIAVIASGV FAGLLGTSQQ EKKALQSTIS SMETKLVENE AAMSMLRENY EKRILDEQVK LKKEARKFQE
201: EEAFLQDQLA SSRRTVTSLT EEVQREKELV EQLNLEIDRL KSSIAEAEED KHLSEGKLKE NMEVLDILYG KVNLLSQEVN GKDEHIRELS SSLSAKEKDY
301: ENLNVICNQA KEDLEQANSQ IKQVEKDVRT AKDDLKSKAS LINSLNEKVQ TLYTEKGEVE EKLSALVSQY TYLKSASEER ASHDSELLVQ KDDMLNQLEE
401: KLSAALSDSS KDRTRIAELN NELVTTRTIL DNEVVANKKL SDLVQFTEEA LTGSRNEVFK LSEELDAVKR SNQDLMTQIS KLTDEASEVR QALANKIEQA
501: ESVYATLSDE LASVREVLKK SEGELEITSK QLVLVSEAHS DLNKELLDAY KQLESTQSEL VKERKINATL NMELEALVKQ SVIESEARKT LQVDLDEATR
601: SLNEVNKSTL CLSKQLETTN SKISAIKEEK DMLSKFLEEQ KKSTVEAQEN MEDAQNTIKR LGTERESFEV RSKKLEEELA TAKGEILRLR RHISTGGSPN
701: TQVLSEAGAA PISSRALKQQ PMNDHVQNIN GADAVASRSP KRIYRRKRKP AA

Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)

001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS

Arabidopsis Description

MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.