Factsheet for Zm00001d039598_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86191	Sorghum	plastid	86.76	80.26
Os01t0180300-01	Rice	plastid	64.4	65.4
HORVU3Hr1G021660.1	Barley	plastid	62.21	59.1
TraesCS3D01G119600.1	Wheat	plastid	62.72	57.96
TraesCS3B01G137100.2	Wheat	plastid	61.95	57.38
TraesCS3A01G117800.2	Wheat	plastid	61.83	57.26
Zm00001d037712_P001	Maize	plastid	47.69	49.34
GSMUA_Achr5P06220_001	Banana	plastid	43.06	41.31
CDY30128	Canola	plastid	33.42	36.11
Bra027196.1-P	Field mustard	plastid	33.16	35.83
VIT_09s0002g04750.t01	Wine grape	nucleus, plastid	32.65	35.33
Bra019290.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.58	35.25
CDX97716	Canola	plastid	32.39	35.0
AT3G16000.1	Thale cress	plastid	32.52	34.85
CDX82420	Canola	plastid	31.23	34.57
PGSC0003DMT400006590	Potato	nucleus	29.95	34.47
Bra001618.1-P	Field mustard	plastid	31.88	34.3
CDX75863	Canola	plastid	31.36	34.22
CDY10951	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	17.48	34.17
KRH31259	Soybean	endoplasmic reticulum, golgi	18.64	33.96
KRH30491	Soybean	plastid	31.88	33.93
CDY21894	Canola	golgi	25.84	33.39
Solyc03g120230.2.1	Tomato	plastid	30.72	33.33
KRH25191	Soybean	plastid	31.62	33.33
Bra021153.1-P	Field mustard	nucleus	13.62	25.79
CDY20172	Canola	nucleus	13.62	25.79

Protein Annotations

EnsemblPlants:Zm00001d039598_P001	EnsemblPlants:Zm00001d039598_T001	EnsemblPlantsGene:Zm00001d039598	ncoils:Coil	PANTHER:PTHR13140	PANTHER:PTHR13140:SF659
ProteinID:ONM29405.1	SEG:seg	UniParc:UPI0008452A00	UniProt:A0A1D6MJB1	MapMan:35.1	:

Description

MAR-binding filament-like protein 1

Coordinates

chr3:+:8673429..8679636

Molecular Weight (calculated)

85622.7 Da

IEP (calculated)

4.706

GRAVY (calculated)

-0.638

Length

778 amino acids

Sequence
(BLAST)

001: MGYLVLSPSP SPSPPHAFQY ASSSSSSSSS SSGATSCRRR TRRGGAFVVA SAASPLDGGL SPAATAADAY VLARRVVLLG ASAIPFVSLG EAAAAPTPVA
101: VDLVKETKNV PKFEGTKGIA KPDNTQPEGT QAETIPEARQ RESSLQLVQE QPPENPLLGF LGIVGVAASG VLGGLYGTSL QEEKALQSIV SSMESKLAEN
201: EAALSLMRDN YEKRLLEQQA AQKKQSMKFQ EQEVSLSGQL ASATKTLTSL SEEFRKEKKL AEELRDEIQR LESSITQAGI DNDVLETKLE EKLGEINFLQ
301: EKVSLLNQEI DDKEKHIREL SASLSSKEVD YQKLTAFTNQ TKKSLELANS RVQQLEEELS TTKNALVSKI SSIDSLNAKL ETLNSEKEEA DKKINELIQE
401: YTDLKVASET RASHDSKLLS ERDDLIKQLE EKLSVALTDS SKDQETIVEL NKELDATKMM LKNELKSMEA LKDSIRSSEE ALKTSRSEVS KLSKELEEAN
501: ELNEDLVSQI SKLREESNEM QVDLTNKLGE AESLSKALSE DLASVNEMVQ KGQEELEATS IELASIAEAR DNLKKELLDA YKNLESTTHE LVEERKIVTA
601: LNKELEALAK QLQVDSEARK SLESDLEEAT KSLDEMNNSA LLLSKELEST HSRSATLESE KEMLRKALAE QTKITTEAKE NTEDAQNLIT RLETEKESFE
701: LRCRHLEEEL ALAKGEILRL RRQISTNSSQ KPRARGPPEA SETLKEQPVN DYNQKTSGVV AGTPQPVKRT VRRRKGGA

Best Arabidopsis Sequence Match ( AT3G16000.1 )
(BLAST)

001: MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN
101: EIKTSKVDLE TEVAVVSEGT SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE AKLQHEQEER KKEVEKAKEE
201: QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK
301: ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN
401: LDRALDDVNK SKDKVADLTE KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI VHEEWKEAKE RYERNLDAEK
501: QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS
601: LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS
701: TDNKEKSDNT VTVKKVVRRR KSSTSS

Arabidopsis Description

MFP1MAR-binding filament-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.