Factsheet for HORVU2Hr1G071540.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G289200.2	Wheat	mitochondrion	96.71	96.71
TraesCS2D01G287200.4	Wheat	mitochondrion	95.39	95.39
TraesCS2B01G305800.6	Wheat	mitochondrion	95.39	93.75
KXG26174	Sorghum	mitochondrion	78.95	79.65
Zm00001d003864_P005	Maize	mitochondrion	76.75	77.43
Zm00001d025300_P007	Maize	mitochondrion	67.54	67.99
Zm00001d011253_P003	Maize	peroxisome	31.14	61.47
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	22.15	45.5
Zm00001d025039_P001	Maize	cytosol	21.93	43.48
PGSC0003DMT400036737	Potato	cytosol	29.82	39.19
Zm00001d043522_P002	Maize	cytosol	19.08	38.67
Solyc03g118070.2.1	Tomato	extracellular	38.6	37.77
HORVU5Hr1G124410.12	Barley	plastid	30.04	27.57

Protein Annotations

EnsemblPlants:HORVU2Hr1G071540.1	EnsemblPlantsGene:HORVU2Hr1G071540	Gene3D:2.60.40.10	Gene3D:3.10.580.10	InterPro:AMPK1_CBM	InterPro:CBS_dom
InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92
PFAM:PF00571	PFAM:PF16561	PFscan:PS51371	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81296
UniParc:UPI000B465C8D	UniProt:A0A287IDS0	MapMan:18.4.5.1.4	MapMan:27.3.1.4	:	:

Description

No Description!

Coordinates

chrchr2H:-:510204747..510223628

Molecular Weight (calculated)

50832.8 Da

IEP (calculated)

6.060

GRAVY (calculated)

0.036

Length

456 amino acids

Sequence
(BLAST)

001: MVLRRFAWPF GGQRASFCGS FTGWRECPMG LVGTEFQVVF DLPPGLYQYR FLVDGVWRCD DTKPIVRDEY GLISNEMLVT LVENNTHPVV QREPSSIGRM
101: NLDEGTILTT MPPESPSRNS GMQIAVFRHR VSEILLHNTI YDVVPVSSKI AILDARLPVK QAFNIMHDEG LALVPLWDDG QGTITGMLTA SDFVLILRKL
201: QMNIRVLGHE ELEMHSVSAW KEAKLQYYGG ADVAGMQRRP LVHVKDSDNL RDVALTIIQN EISSVPIFKS STDISGIPLL NLATLPGILK FLCSKLQEQP
301: EGYPILRNQI SSIPIGTWSQ HTGRASTRQL RTSRLSAPLI TCLDFLLEDR ISSIPIVDDN GSLLDVYSLS DIMALAKNDV YTCIKLEQLT VENALELQYQ
401: VNGRRPCHTC LSTSTLLEVL DQLSVPGVRR LVAIEPMTKS VQGIISLRDA ITFLLG

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.