Factsheet for Zm00001d011253_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025039_P001	Maize	cytosol	50.22	50.43
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	48.05	50.0
Zm00001d025300_P007	Maize	mitochondrion	76.62	39.07
KXG26174	Sorghum	mitochondrion	70.56	36.06
Zm00001d003864_P005	Maize	mitochondrion	69.26	35.4
Zm00001d043522_P002	Maize	cytosol	33.77	34.67
TraesCS2D01G287200.4	Wheat	mitochondrion	61.9	31.36
HORVU2Hr1G071540.1	Barley	mitochondrion	61.47	31.14
TraesCS2A01G289200.2	Wheat	mitochondrion	61.04	30.92
TraesCS2B01G305800.6	Wheat	mitochondrion	60.61	30.17
PGSC0003DMT400036737	Potato	cytosol	28.57	19.02
Solyc03g118070.2.1	Tomato	extracellular	33.33	16.52
Zm00001d012817_P002	Maize	cytosol	22.94	10.69
Zm00001d034896_P003	Maize	golgi, plasma membrane	22.08	9.44

Protein Annotations

EnsemblPlants:Zm00001d011253_P003	EnsemblPlants:Zm00001d011253_T003	EnsemblPlantsGene:Zm00001d011253	Gene3D:3.10.580.10	InterPro:AMPK1_CBM	InterPro:CBS_dom
InterPro:IPR000644	InterPro:Ig_E-set	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	PFAM:PF16561	PFscan:PS51371
ProteinID:AQK96342.1	ProteinID:AQK96344.1	SEG:seg	SUPFAM:SSF54631	SUPFAM:SSF81296	UniParc:UPI000843E5B5
UniProt:A0A1D6FYC2	MapMan:35.1	:	:	:	:

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr8:-:144623902..144628703

Molecular Weight (calculated)

25872.4 Da

IEP (calculated)

5.089

GRAVY (calculated)

-0.087

Length

231 amino acids

Sequence
(BLAST)

001: MYRFLVDGVW RCDETKPFVR DEYGLISNEV LVENNVLPVV QPEPSIRGTN MDKGTILKTM PLEPSSQNPS MQIAVIRHVV SGILLHNTIY DVVPLSSKLT
101: VLDTQLPVKQ AFKIMHDVGL ALVPFWDDRQ GTITGMLTAS DFVLILRKLQ RNIQVIGNEE PISAWKEAKL QFYGGPDAPL NTAKLMFFRV TGYLQIDVGS
201: MDEHSTKSDE EYEGLAMRDV MATGPTMSSK L

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.