Factsheet for Zm00001d025039_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	77.83	80.63
Zm00001d011253_P003	Maize	peroxisome	50.43	50.22
Zm00001d025300_P007	Maize	mitochondrion	55.65	28.26
Zm00001d003864_P005	Maize	mitochondrion	51.74	26.33
KXG26174	Sorghum	mitochondrion	50.87	25.89
Zm00001d043522_P002	Maize	cytosol	23.48	24.0
HORVU2Hr1G071540.1	Barley	mitochondrion	43.48	21.93
TraesCS2D01G287200.4	Wheat	mitochondrion	43.48	21.93
TraesCS2A01G289200.2	Wheat	mitochondrion	42.61	21.49
TraesCS2B01G305800.6	Wheat	mitochondrion	42.17	20.91
Solyc03g118070.2.1	Tomato	extracellular	20.43	10.09
PGSC0003DMT400036737	Potato	cytosol	14.78	9.8
Zm00001d012817_P002	Maize	cytosol	12.61	5.85
Zm00001d034896_P003	Maize	golgi, plasma membrane	12.17	5.19

Protein Annotations

EnsemblPlants:Zm00001d025039_P001	EnsemblPlants:Zm00001d025039_T001	EnsemblPlantsGene:Zm00001d025039	Gene3D:2.60.40.10	Gene3D:3.10.580.10	InterPro:AMPK1_CBM
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	PFAM:PF16561
ProteinID:AQK42816.1	SEG:seg	SUPFAM:SSF81296	UniParc:UPI0008435D37	UniProt:A0A1D6J4A9	MapMan:35.2

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr10:+:100998231..101000685

Molecular Weight (calculated)

25950.0 Da

IEP (calculated)

5.716

GRAVY (calculated)

0.334

Length

230 amino acids

Sequence
(BLAST)

001: MDADLAHARR LPAPPCPCPG PDLADYDAVY GRLPPLLFGC LTMETPFLQV LELLSVWHGH MVTLSVPHTF IWHFYAIQYR FLVDGVWRCD ETKPFVRDEY
101: GLISNEVLVE NNVQPVVQPE PSIIGTNMDK GTILKTMPPE PSSQNPSMQI AVIRHVVSGI LLHNTIYDVV PLSSKLTVLD TQLPVKQAFK IMHDEVCMLL
201: CLLELLQIVH FPSMVLVCSH FNFALFLLSF

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.