Factsheet for Zm00001d012278_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025039_P001	Maize	cytosol	80.63	77.83
Zm00001d011253_P003	Maize	peroxisome	50.0	48.05
Zm00001d025300_P007	Maize	mitochondrion	55.41	27.15
Zm00001d003864_P005	Maize	mitochondrion	51.8	25.44
KXG26174	Sorghum	mitochondrion	50.45	24.78
Zm00001d043522_P002	Maize	cytosol	23.87	23.56
TraesCS2D01G287200.4	Wheat	mitochondrion	45.95	22.37
HORVU2Hr1G071540.1	Barley	mitochondrion	45.5	22.15
TraesCS2A01G289200.2	Wheat	mitochondrion	45.05	21.93
TraesCS2B01G305800.6	Wheat	mitochondrion	44.59	21.34
PGSC0003DMT400036737	Potato	cytosol	14.86	9.51
Solyc03g118070.2.1	Tomato	extracellular	19.82	9.44
Zm00001d012817_P002	Maize	cytosol	13.06	5.85
Zm00001d034896_P003	Maize	golgi, plasma membrane	12.61	5.19

Protein Annotations

EnsemblPlants:Zm00001d012278_P001	EnsemblPlants:Zm00001d012278_T001	EnsemblPlantsGene:Zm00001d012278	Gene3D:2.60.40.10	Gene3D:3.10.580.10	InterPro:AMPK1_CBM
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	PFAM:PF16561
ProteinID:AQK99260.1	SEG:seg	SUPFAM:SSF81296	UniParc:UPI0008428C5E	UniProt:A0A1D6G7Y4	MapMan:35.2

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr8:+:171800887..171802946

Molecular Weight (calculated)

25034.6 Da

IEP (calculated)

4.978

GRAVY (calculated)

0.360

Length

222 amino acids

Sequence
(BLAST)

001: MDLSADAAPL EHVESFVLAF VQALGPDAGP DARPWETPFL QVLELLSVWH GHMVTFSVPH TFIWHFYAIQ YRFLVDGVWR CDETKPFVRD EYGLISNEVL
101: VENNVQPVVQ PEPSIIGTNM DKGTILKTMP PEPSSQNPSM QIAVIRHVVS GILLHNTIYD VVPLSSKLTV LDTQLPVKQA FKIVHDEVCM LLCLLELLQI
201: VHFPSMVLVC SHFNFALFLL SF

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.