Factsheet for Zm00001d043522_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011253_P003	Maize	peroxisome	34.67	33.77
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	23.56	23.87
Zm00001d025039_P001	Maize	cytosol	24.0	23.48
Zm00001d025300_P007	Maize	mitochondrion	41.78	20.75
KXG26174	Sorghum	mitochondrion	40.89	20.35
Zm00001d003864_P005	Maize	mitochondrion	40.89	20.35
HORVU2Hr1G071540.1	Barley	mitochondrion	38.67	19.08
TraesCS2D01G287200.4	Wheat	mitochondrion	38.67	19.08
TraesCS2A01G289200.2	Wheat	mitochondrion	38.22	18.86
TraesCS2B01G305800.6	Wheat	mitochondrion	37.78	18.32
PGSC0003DMT400036737	Potato	cytosol	22.67	14.7
Solyc03g118070.2.1	Tomato	extracellular	26.67	12.88
Zm00001d012817_P002	Maize	cytosol	21.33	9.68
Zm00001d034896_P003	Maize	golgi, plasma membrane	21.33	8.89

Protein Annotations

EnsemblPlants:Zm00001d043522_P002	EnsemblPlants:Zm00001d043522_T002	EnsemblPlantsGene:Zm00001d043522	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644
ncoils:Coil	PANTHER:PTHR13780	PANTHER:PTHR13780:SF35	PFscan:PS51371	ProteinID:ONM38360.1	SEG:seg
SUPFAM:SSF54631	UniParc:UPI0008446B5D	UniProt:A0A1D6NCZ5	MapMan:35.2	:	:

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr3:+:202708582..202712283

Molecular Weight (calculated)

26013.9 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.132

Length

225 amino acids

Sequence
(BLAST)

001: MDKGTILKTM PPEPSSQNPS MQIEVIRHVV SRILLHNTIY DVVPLSSKLT VLDTQLPVKQ AFKIMHDEGL ALVPLWDDRQ GTITGMLTAS DFVLILRKGI
101: LCIGVLKCSR QQKAISREQA AKDLQELEKW REELEALLLA EWSELRGEEL LAYWWREDHW LKAMFLHMRS VIKVEEELVG VPVKDGLYEI RDTSALVRLR
201: PTWEDLRSYL IARGRKCFEV CVYNS

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.