CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003864_P005	Maize	mitochondrion	93.36	93.36
Zm00001d025300_P007	Maize	mitochondrion	81.64	81.46
TraesCS2A01G289200.2	Wheat	mitochondrion	80.75	80.04
TraesCS2D01G287200.4	Wheat	mitochondrion	80.75	80.04
HORVU2Hr1G071540.1	Barley	mitochondrion	79.65	78.95
TraesCS2B01G305800.6	Wheat	mitochondrion	80.31	78.23
Zm00001d011253_P003	Maize	peroxisome	36.06	70.56
Zm00001d025039_P001	Maize	cytosol	25.89	50.87
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	24.78	50.45
Zm00001d043522_P002	Maize	cytosol	20.35	40.89
PGSC0003DMT400036737	Potato	cytosol	29.2	38.04
Solyc03g118070.2.1	Tomato	extracellular	38.94	37.77
EER93064	Sorghum	cytosol	28.76	26.21

Protein Annotations

MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	UniProt:A0A1B6PKI2	InterPro:AMPK1_CBM
InterPro:CBS_dom	InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:KXG26174
ProteinID:KXG26174	ProteinID:KXG26174.1	PFAM:PF00571	PFAM:PF16561	PFscan:PS51371	PANTHER:PTHR13780
PANTHER:PTHR13780:SF92	SMART:SM00116	EnsemblPlantsGene:SORBI_3006G061100	SUPFAM:SSF54631	SUPFAM:SSF81296	UniParc:UPI0001C805E2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:41363761..41371945

Molecular Weight (calculated)

50481.2 Da

IEP (calculated)

5.620

GRAVY (calculated)

0.055

Length

452 amino acids

Sequence
(BLAST)

001: MVLQRFSWPY GGRRASFCGS FTGWRECPMG LVGAEFQVVF DLPPGVYQYR FLVDGVWRCD EAKPFVRDEY GLISNEVLVE NNVQPVVQPE PSIRGTNVDE
101: GIILTTMPPE PSSQNPGVQI AVFRHVVSEI LLHNTIYDVV PISSKLAVLD TQLPVKQAFK IMHDEGLALV PLWDDHQGTI TGMLTASDFV LMLRKLQRNI
201: RVIGNEELEM HPISAWKEAK LQFYGGPDGA AMQRRPLIHV KDSDNLVDVA LTIIRNEISS VPIFKCVPDS TGMPFLSLAT LQGILKFLCS KLQEQAEGCS
301: LLHNQLLSIP IGTWSPHTGR SSSRQLRTLL LSSPLNTCLD FLLQDRVSSI PIVDDNGSLR DVYSLSDIMA LAKNDVYARI ELEQVTVQNA LDVQYQVHGR
401: RQCHTCLQTS TLLEVLEGLS VPGVRRLVVI EQSTRFVEGI ISLRDIFTFL LG

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.