Factsheet for Zm00001d003864_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26174	Sorghum	mitochondrion	93.36	93.36
Zm00001d025300_P007	Maize	mitochondrion	79.87	79.69
TraesCS2D01G287200.4	Wheat	mitochondrion	78.76	78.07
TraesCS2A01G289200.2	Wheat	mitochondrion	78.54	77.85
HORVU2Hr1G071540.1	Barley	mitochondrion	77.43	76.75
TraesCS2B01G305800.6	Wheat	mitochondrion	78.32	76.29
Zm00001d011253_P003	Maize	peroxisome	35.4	69.26
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	25.44	51.8
Zm00001d025039_P001	Maize	cytosol	26.33	51.74
Zm00001d043522_P002	Maize	cytosol	20.35	40.89
PGSC0003DMT400036737	Potato	cytosol	29.87	38.9
Solyc03g118070.2.1	Tomato	extracellular	39.38	38.2
Zm00001d012817_P002	Maize	cytosol	28.98	26.41
Zm00001d034896_P003	Maize	golgi, plasma membrane	28.32	23.7

Protein Annotations

EntrezGene:100284094	MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	InterPro:AMPK1_CBM
EMBL:BT067741	UniProt:C0PHH2	InterPro:CBS_dom	InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	ProteinID:ONM17855.1	ProteinID:ONM17856.1	ProteinID:ONM17857.1	PFAM:PF00571	PFAM:PF16561
PFscan:PS51371	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81296
UniParc:UPI000195CD5B	EnsemblPlantsGene:Zm00001d003864	EnsemblPlants:Zm00001d003864_P005	EnsemblPlants:Zm00001d003864_T005	SEG:seg	:

Description

SNF4

Coordinates

chr2:+:63709239..63723748

Molecular Weight (calculated)

50309.0 Da

IEP (calculated)

5.595

GRAVY (calculated)

0.064

Length

452 amino acids

Sequence
(BLAST)

001: MVMQRFSWPY GGRSASLCGS FTGWREYPMG LVGAEFQVVF DLPPGVYQYR FLVDGVWRCD ETKPFVCDEY GLISNEVLVE NNVQPVVQPE PSIRGTNLDE
101: GTVLTTMPPE SSSQNPGVQI AVFRHVVSGI LLHNTIYEVV PLSSKLAVLD TQLPVKQAFK IMHDEGLALV PLWDDHQGTI TGMLTALDFV LMLRKLQRNI
201: RVTGNEELEM HPISAWKEAK LQFYGGPDGA AMQRRPLIHV KDSDSLADVA LTIIRNEISS VPIFKCMPDS SGVPFLNLAT LQGILKFLCS KLQEQAGGCS
301: LLHNQLLSIP IGTWSPHTGR SSSRHLRTLL LSSPLNTCLD FLLEDRVSSI PIVDDKGALH DVYSLSDIMA LAKNDVYARI ELEQVTVQNA LDVQYQVHGR
401: RQCYTCLQTN TLLEVLEGLS IPGVRRLVVI EQSTRFVEGI ISLRDIFTFL LG

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.