Factsheet for Zm00001d012817_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005108_P003
Zm00001d010811_P002
Zm00001d012321_P001
Zm00001d038745_P002
Zm00001d042811_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09020.1	Zm00001d012321_P001	AT2G40000.1	17028154
AT1G09020.1	Zm00001d042811_P001	AT2G40000.1	17028154
AT1G09020.1	Zm00001d005108_P003	AT3G29160.1	17028154
AT1G09020.1	Zm00001d010811_P002	AT3G29160.1	17028154
AT1G09020.1	Zm00001d038745_P002	AT3G29160.1	17028154
AT1G09020.1	Zm00001d012321_P001	AT3G55840.1	17028154
AT1G09020.1	Zm00001d042811_P001	AT3G55840.1	17028154

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93064	Sorghum	cytosol	95.77	95.77
Os03t0856400-01	Rice	plasma membrane	85.08	85.6
TraesCS5D01G565200.3	Wheat	cytosol, nucleus, peroxisome, plastid	85.08	84.91
TraesCS4A01G320000.1	Wheat	cytosol, nucleus, peroxisome, plastid	85.08	84.91
TraesCS5B01G559100.1	Wheat	cytosol, plastid	84.88	84.71
HORVU5Hr1G124410.12	Barley	plastid	84.27	84.1
Zm00001d034896_P003	Maize	golgi, plasma membrane	88.51	81.3
KRH50894	Soybean	nucleus	64.72	66.6
KRH02229	Soybean	nucleus	64.72	66.6
AT1G09020.1	Thale cress	cytosol, plastid	64.92	66.12
KRH37135	Soybean	cytosol	64.92	65.45
VIT_05s0020g01580.t01	Wine grape	cytosol	64.72	65.38
KRH12134	Soybean	nucleus	64.72	65.38
CDY31116	Canola	plastid	63.51	65.35
Bra030752.1-P	Field mustard	plastid	49.6	64.91
Bra018586.1-P	Field mustard	plastid	57.26	64.69
CDX95016	Canola	plastid	62.9	64.6
CDY32146	Canola	plastid	62.7	64.52
CDY22651	Canola	mitochondrion, plastid	62.7	64.52
CDY06344	Canola	mitochondrion, plastid	62.7	64.52
CDX93522	Canola	plastid	62.5	64.05
Bra031654.1-P	Field mustard	plastid	61.69	62.7
Solyc01g067590.2.1	Tomato	cytosol	59.68	61.41
PGSC0003DMT400027641	Potato	cytosol	42.74	52.74
GSMUA_AchrUn_...	Banana	cytosol	15.93	48.77
Zm00001d003864_P005	Maize	mitochondrion	26.41	28.98
Zm00001d025300_P007	Maize	mitochondrion	23.59	25.83
Zm00001d011253_P003	Maize	peroxisome	10.69	22.94
Zm00001d043522_P002	Maize	cytosol	9.68	21.33
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	5.85	13.06
Zm00001d025039_P001	Maize	cytosol	5.85	12.61

Protein Annotations

MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	EntrezGene:542544	InterPro:AMPK1_CBM
ProteinID:AQK61495.1	ProteinID:AQK61497.1	EMBL:BT068954	UniProt:C0PKY5	InterPro:CBS_dom	InterPro:IPR000644
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00571	PFAM:PF16561	PFscan:PS51371
PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81296	UniParc:UPI000195D069
EnsemblPlantsGene:Zm00001d012817	EnsemblPlants:Zm00001d012817_P002	EnsemblPlants:Zm00001d012817_T002	SEG:seg	:	:

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr5:-:834692..841589

Molecular Weight (calculated)

54846.5 Da

IEP (calculated)

6.671

GRAVY (calculated)

-0.123

Length

496 amino acids

Sequence
(BLAST)

001: MFSHGADSAH DAGAVGVSSG GATVPTRFVW PYGGKRVFVS GSFTRWSEHL PMSPIEGCPT VFQAICSLSP GIHEYKFFVD GEWRHDERQP TISGEFGIVN
101: TLYLTREYNQ INTLSSPSTP GSRMNMDVDN ENFQRTVTLS DGTVSEGTLR VSEAAIQISR CRVSEYLSLH TCYDLLPDSG KVIALDINLP VKQSFHILHE
201: QGIPVAPLWD SFRGQFVGLL SPLDFILILR ELETHGSNLT EEQLETHTIS AWKEAKRQTN GRNDGQWRPQ QHLVHATPYE SLRDIAVKLL QNGISTVPVI
301: YSSSSDGSFP QLLHLASLSG ILKCICRYFK NSTGNLPILN QPVCSIPLGS WVPKIGDLNS RPLAMLRPNA SLSSALNMLV QAGVSSIPIV DDNDSLLDTY
401: SRSDITALAK DKVYTHVRLD EMTIHQALQL GQDANTPFGF FNGQRCQMCL RSDPLLKVME RLANPGVRRV FIVEAGSKRV EGIISLSDIF KFLLSL

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.