Factsheet for Bra031654.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000158.1-P
Bra004994.1-P
Bra007195.1-P
Bra017040.1-P
Bra025379.1-P
Bra033088.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09020.1	Bra000158.1-P	AT2G40000.1	17028154
AT1G09020.1	Bra004994.1-P	AT2G40000.1	17028154
AT1G09020.1	Bra017040.1-P	AT2G40000.1	17028154
AT1G09020.1	Bra025379.1-P	AT3G29160.1	17028154
AT1G09020.1	Bra033088.1-P	AT3G29160.1	17028154
AT1G09020.1	Bra007195.1-P	AT3G55840.1	17028154

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06344	Canola	mitochondrion, plastid	97.13	98.34
Bra018586.1-P	Field mustard	plastid	83.4	92.71
AT1G09020.1	Thale cress	cytosol, plastid	90.57	90.76
Bra030752.1-P	Field mustard	plastid	70.08	90.24
VIT_14s0128g00890.t01	Wine grape	cytosol	74.39	75.31
Solyc01g099280.2.1	Tomato	plastid	68.65	69.36
KRG96825	Soybean	cytosol	66.6	67.99
KRH68539	Soybean	cytosol	66.19	67.57
KRH12134	Soybean	nucleus	67.21	66.8
KRH37135	Soybean	cytosol	67.01	66.46
VIT_05s0020g01580.t01	Wine grape	cytosol	65.16	64.77
KRH50894	Soybean	nucleus	63.73	64.52
KRH02229	Soybean	nucleus	62.7	63.49
Solyc01g067590.2.1	Tomato	cytosol	62.3	63.07
KRG92868	Soybean	cytosol, plastid	62.3	62.55
TraesCS5B01G559100.1	Wheat	cytosol, plastid	63.32	62.17
TraesCS5D01G565200.3	Wheat	cytosol, nucleus, peroxisome, plastid	63.32	62.17
TraesCS4A01G320000.1	Wheat	cytosol, nucleus, peroxisome, plastid	62.91	61.77
Zm00001d012817_P002	Maize	cytosol	62.7	61.69
HORVU5Hr1G124410.12	Barley	plastid	62.7	61.57
KRH33916	Soybean	cytosol	29.71	61.18
EER93064	Sorghum	cytosol	61.89	60.89
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	23.57	58.97
Zm00001d034896_P003	Maize	golgi, plasma membrane	57.99	52.41
GSMUA_AchrUn_...	Banana	cytosol	14.34	43.21
PGSC0003DMT400027640	Potato	cytosol	26.84	33.94
Os04t0401300-01	Rice	mitochondrion	1.23	4.8

Protein Annotations

MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	InterPro:AMPK1_CBM	EnsemblPlantsGene:Bra031654
EnsemblPlants:Bra031654.1	EnsemblPlants:Bra031654.1-P	InterPro:CBS_dom	InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	UniProt:M4ES76	PFAM:PF00571	PFAM:PF16561	PFscan:PS51371	PANTHER:PTHR13780
PANTHER:PTHR13780:SF92	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81296	UniParc:UPI0002543298	SEG:seg

Description

AT1G09020 (E=8e-252) SNF4, ATSNF4 | SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator

Coordinates

chrA09:+:35371240..35375120

Molecular Weight (calculated)

53945.0 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.052

Length

488 amino acids

Sequence
(BLAST)

001: MFGSTLANNR GNSAASAQLV TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPSVFQ VICNLTPGYH QYKFYVDGEW RHDEHQPFVN GNGGVMNTIL
101: ITLPDMVPTG FSPSSMDVDD FSHRMADPSQ DSIPRMSAVD LEMSRHRISV LLSTRTAYEL LPESGKVIAL DVNLPVKQAF HILYEQGIPL APLWDFGKGQ
201: FVGVLGPLDF ILILREISVV SNLERMDQTL TEEELETHTI AAWKEGKAHI SRQYDGTGRP YPRPLVQVGP YDNLKDVAMK ILQNKVAAVP VIYSSLQDES
301: YPQLLHLASL SGILKCICRY FRHSSSSLPI LQQPVCSIPL GTWVPRIGES SSKPLATLRP HASLGSALSL LVQAEVSAIP VVDDNDSLID IYSRSDITAL
401: AKDKAYAQIH LDDMTVHQAL QLGQDASPPY GMFNGQRCQM CLRSDSLGKV IERLANPGVR RLVIVEAGSK RVEGIISLSD VFKFLLGL

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.