Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 2
- peroxisome 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g067030.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G09020.1 | Solyc02g067030.2.1 | AT3G29160.1 | 17028154 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027641 | Potato | cytosol | 63.9 | 76.62 |
| VIT_05s0020g01580.t01 | Wine grape | cytosol | 69.92 | 68.64 |
| KRH12134 | Soybean | nucleus | 69.92 | 68.64 |
| KRH37135 | Soybean | cytosol | 69.29 | 67.89 |
| KRH50894 | Soybean | nucleus | 67.22 | 67.22 |
| KRH02229 | Soybean | nucleus | 67.01 | 67.01 |
| AT1G09020.1 | Thale cress | cytosol, plastid | 65.98 | 65.3 |
| Solyc01g099280.2.1 | Tomato | plastid | 65.35 | 65.22 |
| CDX95016 | Canola | plastid | 65.15 | 65.01 |
| Bra018586.1-P | Field mustard | plastid | 59.13 | 64.92 |
| CDX93522 | Canola | plastid | 65.15 | 64.88 |
| CDY31116 | Canola | plastid | 64.73 | 64.73 |
| CDY32146 | Canola | plastid | 64.52 | 64.52 |
| CDY06344 | Canola | mitochondrion, plastid | 64.52 | 64.52 |
| CDY22651 | Canola | mitochondrion, plastid | 64.32 | 64.32 |
| Bra030752.1-P | Field mustard | plastid | 50.0 | 63.59 |
| Bra031654.1-P | Field mustard | plastid | 63.07 | 62.3 |
| Os03t0856400-01 | Rice | plasma membrane | 62.66 | 61.26 |
| TraesCS5B01G559100.1 | Wheat | cytosol, plastid | 62.45 | 60.56 |
| TraesCS5D01G565200.3 | Wheat | cytosol, nucleus, peroxisome, plastid | 62.45 | 60.56 |
| TraesCS4A01G320000.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 62.24 | 60.36 |
| EER93064 | Sorghum | cytosol | 62.03 | 60.28 |
| HORVU5Hr1G124410.12 | Barley | plastid | 61.83 | 59.96 |
| Zm00001d012817_P002 | Maize | cytosol | 61.41 | 59.68 |
| Zm00001d034896_P003 | Maize | golgi, plasma membrane | 58.51 | 52.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.94 | 44.44 |
| Solyc03g118070.2.1 | Tomato | extracellular | 31.12 | 32.19 |
Protein Annotations
| EnsemblPlants:Solyc01g067590.2.1 | EnsemblPlantsGene:Solyc01g067590.2 | Gene3D:2.60.40.10 | Gene3D:3.10.580.10 | InterPro:AMPK1_CBM | InterPro:CBS_dom |
| InterPro:IPR000644 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF92 |
| PFAM:PF00571 | PFAM:PF16561 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81296 | UniParc:UPI000276315F | UniProt:K4AX07 | MapMan:18.4.5.1.4 | MapMan:27.3.1.4 | : |
Description
No Description!
Coordinates
chr1:-:76388937..76401012
Molecular Weight (calculated)
53204.8 Da
IEP (calculated)
5.847
GRAVY (calculated)
-0.067
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYARDGGTA LIPTRFVWPY GGRSVYLSGT FTGWSQWPMA PVEGCPTVFQ TVCSVPPGYH QYKFIVDGEW RHDENQPFVS GGNLGTVNTV LLARESDYLP
101: AVLSAQIPPS SNMDVDNQAF QRLVRVSDVA LPDDTPRISQ TDLDISRHRI SAVLSTHSAY ELLPGSSKVI ALDVDLPVKQ AFHILHEQGI PMAPLWDFSR
201: AQFVGVLSAL DFILIMRELG NHGSNLTEEE LETHTISAWK EAKSYLSRQA NELGKSAPRR LVWSGPDNSL KDVALEILQN GVATVPIIHS PAQDGSYPQL
301: LYVASLSDIL KHICRYFKHS PESLPILQLP IGAIPLGTWV PKIGEPNRQP LAMLRPTASL NAALNLLVQA QVSAIPIVDD NDSLLDIYSR SDITALAKDK
401: IYTHINLEEM SIHQALQLAE EPYATYGLSS QKCHMCLQSD SLHEVMERLS RPGVRRLVVV EAGSKRVEGI ISVGDIFKFL LG
101: AVLSAQIPPS SNMDVDNQAF QRLVRVSDVA LPDDTPRISQ TDLDISRHRI SAVLSTHSAY ELLPGSSKVI ALDVDLPVKQ AFHILHEQGI PMAPLWDFSR
201: AQFVGVLSAL DFILIMRELG NHGSNLTEEE LETHTISAWK EAKSYLSRQA NELGKSAPRR LVWSGPDNSL KDVALEILQN GVATVPIIHS PAQDGSYPQL
301: LYVASLSDIL KHICRYFKHS PESLPILQLP IGAIPLGTWV PKIGEPNRQP LAMLRPTASL NAALNLLVQA QVSAIPIVDD NDSLLDIYSR SDITALAKDK
401: IYTHINLEEM SIHQALQLAE EPYATYGLSS QKCHMCLQSD SLHEVMERLS RPGVRRLVVV EAGSKRVEGI ISVGDIFKFL LG
001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
Arabidopsis Description
SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.