Factsheet for Solyc01g099280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g067030.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09020.1	Solyc02g067030.2.1	AT3G29160.1	17028154

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063659	Potato	cytosol, plastid	97.93	97.93
VIT_14s0128g00890.t01	Wine grape	cytosol	79.3	79.46
AT1G09020.1	Thale cress	cytosol, plastid	73.91	73.31
CDY31116	Canola	plastid	71.64	71.78
Bra018586.1-P	Field mustard	plastid	65.22	71.75
CDX95016	Canola	plastid	71.64	71.64
CDY06344	Canola	mitochondrion, plastid	71.01	71.16
CDY22651	Canola	mitochondrion, plastid	71.01	71.16
CDX93522	Canola	plastid	71.22	71.07
CDY32146	Canola	plastid	70.81	70.95
KRG96825	Soybean	cytosol	69.77	70.5
Bra030752.1-P	Field mustard	plastid	55.07	70.18
KRH68539	Soybean	cytosol	69.15	69.87
Bra031654.1-P	Field mustard	plastid	69.36	68.65
KRG92868	Soybean	cytosol, plastid	66.46	66.05
Solyc01g067590.2.1	Tomato	cytosol	65.22	65.35
KRH33916	Soybean	cytosol	31.47	64.14
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	23.6	58.46
Solyc03g118070.2.1	Tomato	extracellular	30.85	31.97

Protein Annotations

MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	InterPro:AMPK1_CBM	InterPro:CBS_dom
GO:GO:0000003	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0006464
GO:GO:0006810	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009856	GO:GO:0009859	GO:GO:0009875	GO:GO:0009987	GO:GO:0009991	GO:GO:0016043
GO:GO:0016301	GO:GO:0016559	GO:GO:0016740	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0042149	GO:GO:0045859	GO:GO:0046777	GO:GO:2000377	InterPro:IPR000644	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K4B0W5	PFAM:PF00571	PFAM:PF16561	PFscan:PS51371
PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81296	EnsemblPlantsGene:Solyc01g099280.2
EnsemblPlants:Solyc01g099280.2.1	UniParc:UPI0002768D64	:	:	:	:

Description

Sucrose nonfermenting 4-like protein [Source:Projected from Arabidopsis thaliana (AT1G09020) UniProtKB/Swiss-Prot;Acc:Q944A6]

Coordinates

chr1:-:89551518..89564113

Molecular Weight (calculated)

53085.0 Da

IEP (calculated)

6.503

GRAVY (calculated)

0.037

Length

483 amino acids

Sequence
(BLAST)

001: MFGSGSDSGQ NHTGVAGAVL MPTRFVWPYG GRRVLLSGSF TRWQDHITMS PMEGCPTVFQ VVCNLVPGYH QYKFFVDGEW CHDERQPVVS GNYGLVNTIF
101: LPRESDTIPE LLSPDVPAGS NMDVDNDFLR LDAVPQISQA EIELSRQRIS AFLSTHTAYE LLPESGKVIA LDVNLPVKQA FHVLYEQGIS VAPLWDFFKG
201: QFVGVLTAID FILILMELGT HGSNLTEEEL ETHSISAWKG GKLRINRQID CNLNSYSRSL VHGGPYDSLK DLALRFLQNK VSTLPIIHSS SPDGSFPQLL
301: HLATLSGILK CICRHFKHSS SSLPILQQPI CSIPIGTWVP KIGESSGKPV AMLRPNASLG AALSLLVQAE VSAIPIVDDN DSLLDIYCRS DITALAKDRA
401: YAQIRLDELS IHQAIQLGQD ASSPHGLFNG QRCQMCLRSD PLHKVMERLA VPGARRLVIV EAGSKRVEGI ISVTDVFRFL LGC

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.