Factsheet for Solyc03g118070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036737	Potato	cytosol	65.02	87.32
Zm00001d003864_P005	Maize	mitochondrion	38.2	39.38
KXG26174	Sorghum	mitochondrion	37.77	38.94
TraesCS2A01G289200.2	Wheat	mitochondrion	37.98	38.82
HORVU2Hr1G071540.1	Barley	mitochondrion	37.77	38.6
TraesCS2D01G287200.4	Wheat	mitochondrion	37.55	38.38
TraesCS2B01G305800.6	Wheat	mitochondrion	37.55	37.72
Zm00001d025300_P007	Maize	mitochondrion	34.76	35.76
Zm00001d011253_P003	Maize	peroxisome	16.52	33.33
Solyc01g067590.2.1	Tomato	cytosol	32.19	31.12
Solyc01g099280.2.1	Tomato	plastid	31.97	30.85
Zm00001d043522_P002	Maize	cytosol	12.88	26.67
Zm00001d025039_P001	Maize	cytosol	10.09	20.43
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	9.44	19.82

Protein Annotations

EnsemblPlants:Solyc03g118070.2.1	EnsemblPlantsGene:Solyc03g118070.2	Gene3D:2.60.40.10	Gene3D:3.10.580.10	InterPro:AMPK1_CBM	InterPro:CBS_dom
InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92
PFAM:PF00571	PFAM:PF16561	PFscan:PS51371	SEG:seg	SMART:SM00116	SUPFAM:SSF54631
SUPFAM:SSF81296	UniParc:UPI0002767A55	UniProt:K4BLV8	MapMan:18.4.5.1.4	MapMan:27.3.1.4	:

Description

No Description!

Coordinates

chr3:+:67048199..67055303

Molecular Weight (calculated)

51984.7 Da

IEP (calculated)

5.796

GRAVY (calculated)

0.033

Length

466 amino acids

Sequence
(BLAST)

001: MVLLTFTWSH GGIHVFLCGS FDGWSEQIPM NLVEGSAAVF QRTVDVPPGY HKYKFLVDGI WQVDQDQLCV QDEYGAINNL VFVEDSVSMP SALIREDAQS
101: NLVSGFTSST HLEASSSSES PLEPVMQLLN NEIDVSRHRL FMFLSSSQAY ELIPNSGKVF ALDTKVAVKQ AFHIMYEQRL AVMPLWDGQN AMISGMLTAS
201: DFILILLKLQ ESHPMLTHDE LEMHTISAWK YGKSQLQAEV SGTMIPPNRR VLQAGPDESL KDVTLTLLQN KISAVPVLHS PEDGSSLQLL HTACLAGILK
301: HIYRHFRHSL EYLPIVQQPV GNLPFGTWTR EVGGRGSSRV LLTLHSGDLL SSALKLLIEG EISSIPIVDD NGALINVYSR SDITSLARGS VYAHFRLDQM
401: IMTQVLQVLD EASRDRCRTC TRFDPLYRIM EVLSDPTVRR VVVIDPNSRH VEGIITLRDV FNLLLG

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.