Factsheet for Zm00001d025300_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26174	Sorghum	mitochondrion	81.46	81.64
Zm00001d003864_P005	Maize	mitochondrion	79.69	79.87
Zm00001d011253_P003	Maize	peroxisome	39.07	76.62
TraesCS2D01G287200.4	Wheat	mitochondrion	68.87	68.42
TraesCS2A01G289200.2	Wheat	mitochondrion	68.43	67.98
HORVU2Hr1G071540.1	Barley	mitochondrion	67.99	67.54
TraesCS2B01G305800.6	Wheat	mitochondrion	67.99	66.38
Zm00001d025039_P001	Maize	cytosol	28.26	55.65
Zm00001d012278_P001	Maize	cytosol, peroxisome, plasma membrane	27.15	55.41
Zm00001d043522_P002	Maize	cytosol	20.75	41.78
Solyc03g118070.2.1	Tomato	extracellular	35.76	34.76
PGSC0003DMT400036737	Potato	cytosol	24.94	32.56
Zm00001d012817_P002	Maize	cytosol	25.83	23.59
Zm00001d034896_P003	Maize	golgi, plasma membrane	25.17	21.11

Protein Annotations

EntrezGene:100279316	Gene3D:2.60.40.10	Gene3D:3.10.580.10	MapMan:35.1	UniProt:A0A1D6J6D5	InterPro:AMPK1_CBM
ProteinID:AQK43482.1	InterPro:CBS_dom	InterPro:IPR000644	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
PFAM:PF00571	PFAM:PF16561	PFscan:PS51371	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	SUPFAM:SSF54631
SUPFAM:SSF81296	UniParc:UPI0008438E8F	EnsemblPlantsGene:Zm00001d025300	EnsemblPlants:Zm00001d025300_P007	EnsemblPlants:Zm00001d025300_T007	SEG:seg

Description

Sucrose nonfermenting 4-like protein

Coordinates

chr10:-:113291332..113298776

Molecular Weight (calculated)

50936.4 Da

IEP (calculated)

7.083

GRAVY (calculated)

0.158

Length

453 amino acids

Sequence
(BLAST)

001: MVLQRFSWPY GGRSATFCGS FTGWRECPMG LVGAVFQVVF DLPPGVYQYR FLVDGVWRCD ETKPFVRDEY GLISNEVLVE NNVQPVVQPE PSIRGTNMDK
101: GTILKTMPPE PSSQNPSMQI AVIRHVVSGI LLHNTIYDVV PLSSKLTVLD TQLPVKQAFK IMHDEVCMLL CLLELLQIVH FPSMGLALVP LWDDRQGTIT
201: GMLTASDFVL ILRKLQRNIQ VIGNEEPISA WKEAKLQFYG GPDGAAMQRR PLIHVKDSDN LVDVALTIIR NEISSVPIFK CMADSSGVPF LNLATLQGIL
301: KFLCSKLQEE AEGCSLLHNQ LLSIPIGTWS PHTGRSSSRQ LRTLLLSSPL NTCLDILLQD RVSSIPIVDD NGSLRDVYSL RCMAEDSVIL VYRRVPCWKF
401: WRDCPFQLIL FLYKTDARYV LSSGVRRLVV IEQSTRFVEG IISLRDVFTF LLG

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.