Factsheet for Os03t0856400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93064	Sorghum	cytosol	86.82	86.29
TraesCS5D01G565200.3	Wheat	cytosol, nucleus, peroxisome, plastid	86.21	85.51
TraesCS4A01G320000.1	Wheat	cytosol, nucleus, peroxisome, plastid	86.0	85.31
Zm00001d012817_P002	Maize	cytosol	85.6	85.08
TraesCS5B01G559100.1	Wheat	cytosol, plastid	85.6	84.91
HORVU5Hr1G124410.12	Barley	plastid	85.19	84.51
Zm00001d034896_P003	Maize	golgi, plasma membrane	80.53	73.52
KRH50894	Soybean	nucleus	65.31	66.81
KRH02229	Soybean	nucleus	65.11	66.6
KRH37135	Soybean	cytosol	66.13	66.26
KRH12134	Soybean	nucleus	65.92	66.19
VIT_05s0020g01580.t01	Wine grape	cytosol	65.31	65.58
Solyc01g067590.2.1	Tomato	cytosol	61.26	62.66
PGSC0003DMT400027641	Potato	cytosol	44.02	53.98
GSMUA_AchrUn_...	Banana	cytosol	16.43	50.0
Os04t0401300-01	Rice	mitochondrion	1.22	4.8

Protein Annotations

MapMan:18.4.5.1.4	Gene3D:2.60.40.10	MapMan:27.3.1.4	Gene3D:3.10.580.10	EntrezGene:4334839	ProteinID:AAP21389.1
ProteinID:AAS01982.1	ProteinID:ABF99987.1	EMBL:AK102647	EMBL:AK111501	InterPro:AMPK1_CBM	ProteinID:BAF13863.1
ProteinID:BAS87448.1	InterPro:CBS_dom	ProteinID:EEE60333.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000644
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlantsGene:Os03g0856400	EnsemblPlants:Os03t0856400-01	PFAM:PF00571
PFAM:PF16561	PFscan:PS51371	PANTHER:PTHR13780	PANTHER:PTHR13780:SF92	UniProt:Q84M80	SMART:SM00116
SUPFAM:SSF54631	SUPFAM:SSF81296	UniParc:UPI00001909A6	RefSeq:XP_015630980.1	:	:

Description

cystathionine b-synthase domain containing protein OsCBSX8, CBS domain containing protein OsCBSX8Similar to Protein kinase AKINbetagamma-2. (Os03t0856400-01);Similar to Protein kinase AKINbetagamma-2. (Os03t0856400-02)

Coordinates

chr3:+:36124479..36131991

Molecular Weight (calculated)

54496.2 Da

IEP (calculated)

6.669

GRAVY (calculated)

-0.141

Length

493 amino acids

Sequence
(BLAST)

001: MFSHGADSAH DAGAVSTGAS GVPTRFVWPY GGKRVYLTGS FTRWTEHLPM SPVEGCPTVF QAICSLSPGI HQYKFCVDGE WRHDERQPTI TGDYGVVNTL
101: CLTRDFDQIN TILSPSTPGS RMNMDVDNDN FQRTVSLSDG IIQEGPQRIS EAAIQISRCR VADFLNGQTG YDLLPDSGKV IALDVNLPVK QSFHILHEQG
201: IPVAPLWDSF RGQFVGLLSP LDFILILREL ETHGSNLTEE QLETHTISAW KEAKRQTYAR NEGSWRANHH LVHATPYESL REIAMKILQN GVSTVPIMFS
301: SSPDGSYPQL LHLASLSGIL KCICRYFKNS QGNLPILSQP VCTIPLGTWV PKIGDPNGRP LAMLRPNTSL SAALNLLVQA GVSSIPIVDD NDSLLDTYSR
401: SDITALAKDK VYTHIRLDEM TIHQALQLGQ DANSPFGFFN GQRCQMCLRS DTLLKVMERL ANPGVRRVFI VEAGSKRVEG IISLSDIFKF LLS

Best Arabidopsis Sequence Match ( AT1G09020.1 )
(BLAST)

001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL

Arabidopsis Description

SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.