Factsheet for Zm00001d012321_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d012321_P001
Zm00001d012817_P002
Zm00001d034896_P003
Zm00001d042811_P001
Zm00001d047883_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40000.1	Zm00001d012817_P002	AT1G09020.1	17028154
AT2G40000.1	Zm00001d034896_P003	AT1G09020.1	17028154
AT3G55840.1	Zm00001d012817_P002	AT1G09020.1	17028154
AT3G55840.1	Zm00001d034896_P003	AT1G09020.1	17028154
AT3G55840.1	Zm00001d002027_P002	AT1G71230.1	21798944
AT3G55840.1	Zm00001d012321_P001	AT3G55840.1	21798944
AT3G55840.1	Zm00001d042811_P001	AT3G55840.1	21798944
AT3G55840.1	Zm00001d047883_P001	AT5G16080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33721	Sorghum	plastid	88.19	89.13
Zm00001d042811_P001	Maize	cytosol	85.44	86.54
TraesCS3A01G368800.1	Wheat	cytosol	78.27	79.44
TraesCS3D01G361800.1	Wheat	cytosol	78.06	79.23
HORVU3Hr1G084830.1	Barley	cytosol	77.85	79.02
Os01t0855600-01	Rice	plasma membrane	78.06	78.06
TraesCS3B01G400800.1	Wheat	cytosol, mitochondrion, plastid	76.79	77.94
HORVU3Hr1G111690.1	Barley	cytosol	19.2	67.41
GSMUA_Achr5P28920_001	Banana	cytosol	51.05	59.75
GSMUA_Achr10P...	Banana	nucleus	53.59	57.86
GSMUA_Achr11P...	Banana	plastid	55.27	55.39
CDY20507	Canola	cytosol	21.31	51.27
VIT_13s0067g00260.t01	Wine grape	cytosol, nucleus, plastid, vacuole	51.05	50.84
CDX68585	Canola	cytosol	8.65	50.0
CDY04614	Canola	cytosol	8.65	50.0
CDX72167	Canola	cytosol	8.44	48.78
AT3G55840.1	Thale cress	cytosol, plastid	42.62	47.2
KRG97765	Soybean	plastid	44.3	46.56
CDY27261	Canola	cytosol	41.56	46.35
CDX72197	Canola	cytosol	41.56	46.35
Bra007195.1-P	Field mustard	cytosol	41.14	45.88
KRH31120	Soybean	nucleus	43.67	45.49
Bra000158.1-P	Field mustard	cytosol, nucleus, vacuole	40.51	45.28
CDY24933	Canola	cytosol	40.08	45.02
CDY60990	Canola	cytosol, nucleus, plastid, vacuole	40.08	44.92
CDX74813	Canola	cytosol	39.66	44.87
CDY70017	Canola	cytosol	39.45	44.52
Bra004994.1-P	Field mustard	cytosol	39.24	44.5
AT2G40000.1	Thale cress	cytosol	40.3	43.91
Bra017040.1-P	Field mustard	cytosol	37.76	42.52
CDY07047	Canola	cytosol	37.55	42.28
CDY61713	Canola	cytosol	37.34	41.94
KRH73164	Soybean	cytosol	38.19	41.42
KRH14977	Soybean	plastid	40.72	41.42

Protein Annotations

KEGG:00380+1.13.11.11	MapMan:35.1	ProteinID:AQK99336.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950
GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019441
GO:GO:0020037	GO:GO:0046872	InterPro:HSPRO1/HSPRO2	InterPro:HSPRO1_N	InterPro:Hs1pro-1_C	UniProt:K7VNA8
PFAM:PF07014	PFAM:PF07231	PANTHER:PTHR34795	SUPFAM:SSF140959	InterPro:Trp/Indoleamine_2_3_dOase-like	UniParc:UPI000220B537
EnsemblPlantsGene:Zm00001d012321	EnsemblPlants:Zm00001d012321_P001	EnsemblPlants:Zm00001d012321_T001	SEG:seg	:	:

Description

Nematode resistance protein-like HSPRO2

Coordinates

chr8:+:172400471..172401895

Molecular Weight (calculated)

51762.8 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.151

Length

474 amino acids

Sequence
(BLAST)

001: MATPKLSPVS PVRQDGNDKP CAPSSPSSSP STVLSAQDAY EQHLRLPELS SLWTAGCFPE WAGEGLVKPA LQALEVTFRL ASLALSDPRG HAGRRELARR
101: LESLAAREVE LVSALCEGDG RGAPLAELSA SGGVLPRERS ASEVVVWQLP GSAAAVVCRA SEASLLPRLA AWEKSEALAA RITYAVEGQM QGCAFTLGLG
201: EPNLAGKPVL EYDRVVRPHE LHALKPDPAP EPMSGYRNRE LETLFTMYQI LESWLRVASQ LLTRLDERIE DKCWEAAAGD CWILERVWKL LADVEDLHLL
301: MDPDEFLRLK SQLAVRAAPG SESASFCFRS TALLHVASAT RDLKKRVPWV LGVEADPSGG PRVQEAAMKL YHSRRRGEGE EAGKVDLLQA FQAVEVAVRA
401: FFFGYRQLVA AVMGTAEASG NRALFVPAEE MDPLAQMFLE PPYYPSLDAA KTFLADYWVQ LQQMAEASAP SRQS

Best Arabidopsis Sequence Match ( AT2G40000.1 )
(BLAST)

001: MVDMDWKRKM VSSDLPNSPK LSSKLHVTIP SPFKIVPVSS PISCSAPALC SAYELYLRLP ELRKLWSSRD FPQWTSEPIL KPALQALEIS FRLVFAVCSD
101: TRPYINHREW NRRLDSLITK QIQLVAAICE DEEEEGISAE APVGGGRSSL SLLPQLATWR RSEALGKKIL YTIDNEMSRC KYTLGLGEQN IAGKPNLRYD
201: AICRPNEIYS LKDNPYADHI DNHENQTLYI IHQILESWIY ASGNLLNRIV SSIEEEKFGK ASNDVYLLEK IWKILAEIED LHMLMDPEDF LKLKKQLQIK
301: STGKNDAFCF RSKGLVEMMK MSKDLRQKVP AVLAVEVDPT GGPRLQEAAM KLYARKTECD KIHLLQGMQA VEAAAKSFFF GYRQLVAAMM GSAEMNATAS
401: QESCDSLSQI FMEPTYFPSL DAAKTFLGEF WSHLG

Arabidopsis Description

HSPRO2Nematode resistance protein-like HSPRO2 [Source:UniProtKB/Swiss-Prot;Acc:O04203]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.