Factsheet for Os01t0855600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0855600-01
Os03t0258200-01
Os04t0401300-01
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40000.1	Os04t0401300-01	AT1G09020.1	17028154
AT3G55840.1	Os04t0401300-01	AT1G09020.1	17028154
AT3G55840.1	Os04t0654700-02	AT1G71230.1	21798944
AT3G55840.1	Os01t0855600-01	AT3G55840.1	21798944
AT3G55840.1	Os03t0258200-01	AT5G16080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33721	Sorghum	plastid	83.54	84.44
HORVU3Hr1G084830.1	Barley	cytosol	82.49	83.73
TraesCS3D01G361800.1	Wheat	cytosol	82.07	83.3
TraesCS3A01G368800.1	Wheat	cytosol	82.07	83.3
Zm00001d042811_P001	Maize	cytosol	81.65	82.69
TraesCS3B01G400800.1	Wheat	cytosol, mitochondrion, plastid	81.43	82.66
Zm00001d012321_P001	Maize	plastid	78.06	78.06
HORVU3Hr1G111690.1	Barley	cytosol	20.68	72.59
GSMUA_Achr5P28920_001	Banana	cytosol	51.69	60.49
GSMUA_Achr10P...	Banana	nucleus	54.85	59.23
GSMUA_Achr11P...	Banana	plastid	58.02	58.14
CDY04614	Canola	cytosol	9.92	57.32
CDX68585	Canola	cytosol	9.92	57.32
CDY20507	Canola	cytosol	23.21	55.84
CDX72167	Canola	cytosol	9.49	54.88
VIT_13s0067g00260.t01	Wine grape	cytosol, nucleus, plastid, vacuole	51.69	51.47
Bra000158.1-P	Field mustard	cytosol, nucleus, vacuole	43.46	48.58
CDY24933	Canola	cytosol	43.04	48.34
CDY60990	Canola	cytosol, nucleus, plastid, vacuole	43.04	48.23
KRG97765	Soybean	plastid	44.94	47.23
AT3G55840.1	Thale cress	cytosol, plastid	42.41	46.96
CDY70017	Canola	cytosol	41.56	46.9
Bra004994.1-P	Field mustard	cytosol	40.93	46.41
KRH31120	Soybean	nucleus	44.51	46.37
CDX74813	Canola	cytosol	40.93	46.3
CDY27261	Canola	cytosol	41.35	46.12
CDX72197	Canola	cytosol	41.14	45.88
Bra007195.1-P	Field mustard	cytosol	40.93	45.65
AT2G40000.1	Thale cress	cytosol	41.56	45.29
Bra017040.1-P	Field mustard	cytosol	39.03	43.94
CDY61713	Canola	cytosol	39.03	43.84
CDY07047	Canola	cytosol	38.82	43.71
KRH14977	Soybean	plastid	40.51	41.2
KRH73164	Soybean	cytosol	37.97	41.19

Protein Annotations

KEGG:00380+1.13.11.11	MapMan:35.1	EntrezGene:4324829	EMBL:AK099776	EMBL:AY224522	ProteinID:BAF06756.1
ProteinID:BAS75288.1	ProteinID:EAZ14191.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019441	GO:GO:0020037
GO:GO:0046872	InterPro:HSPRO1/HSPRO2	InterPro:HSPRO1_N	InterPro:Hs1pro-1_C	EnsemblPlantsGene:Os01g0855600	EnsemblPlants:Os01t0855600-01
PFAM:PF07014	PFAM:PF07231	PANTHER:PTHR34795	UniProt:Q7E5I4	SUPFAM:SSF140959	InterPro:Trp/Indoleamine_2_3_dOase-like
UniParc:UPI000005F8F6	RefSeq:XP_015638006.1	SEG:seg	:	:	:

Description

putative nematode-resistance proteinSimilar to Hs1pro-1 protein. (Os01t0855600-01)

Coordinates

chr1:-:36942716..36944585

Molecular Weight (calculated)

52482.8 Da

IEP (calculated)

6.773

GRAVY (calculated)

-0.230

Length

474 amino acids

Sequence
(BLAST)

001: MATPKLSPVS PVRPEDKQRA SSSSSSGAVA APLRVQDDTA VEEYEQYLRL PELARLWKDR CCPEWADEGL VKPALQALEI TFRFISVALS DPRGYASRRE
101: LARRLEALAA REVELVAALC EGEQCPPLAE LSASKGVLPR ERSASEVWKI PGSAAAVVCQ VSEASLLPRL AAWDKSETVA ARIKYAIESQ MQGCVFTLGL
201: GEPNLAGKPV LEYDRVVRPH ELHALKAKIA PEPKTGYRNK ENEALFTIHQ ILESWLCAAS QLLTRLNNRI EARNWEAAAS DCWILERVWK LLADVEDLHL
301: LMDPDDFLRL KSQLAIRAAP GSDASSCFRS RALLHVANAT RDLKKRVPCV LGVEVDPNGG PRVQEAAMRL FHSRRRGEGE EAGKVELLQA FQAVEAAVRR
401: FFFAYRQLVA AVMGTAESST NRALFSPAEE MDPLAQMFLE PPYFPSLDAA KTFLADYWVR RMAGDGDSAS SRRS

Best Arabidopsis Sequence Match ( AT3G55840.1 )
(BLAST)

001: MADLDLQRKM VSPKLHVTIP EPCKLSSVSS PISSSSSAAC SAYELYLRLP ELRNLWSSLY FPHWISEPVL KPALQALEIT FRLILTVASD TRPYINRREW
101: IRRLDSLTTS QIKIVAAICG DEDNYEENVS AAPVSNGWSS LSLLSEIATC RTSESVGQKI LSTIENEMRW CKYTLGLGEP NLAGKPYLQY DAVCLPEELH
201: SLKNNPYADH IENQENQMLY TSHQILESWI YVSVNLLYRI ESRIEEGKFE KASSDVYLLE RIWKLLSEIE DLHILMDPED FLKVKKQLQI KSTFPNDAFC
301: FRSKGLVEMA KMSKELRQKV PAVLEVEVDP TGGPRLQEAA MKLYSRKTEY EKIHLLQGMQ AVESAAKRFF FGYQKLVAAM IGNAEANANR TVANHESYDS
401: LTQVFMEPPY YPSLDAAKTF LGEFWSQL

Arabidopsis Description

HSPRO1Nematode resistance protein-like HSPRO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY61]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.