Factsheet for GSMUA_Achr11P24120_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr5P28920_001
GSMUA_Achr6P16980_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40000.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT2G40000.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT3G55840.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT3G55840.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT3G55840.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT3G55840.1	GSMUA_Achr10P...	AT3G55840.1	21798944
AT3G55840.1	GSMUA_Achr11P...	AT3G55840.1	21798944
AT3G55840.1	GSMUA_Achr5P28920_001	AT3G55840.1	21798944
AT3G55840.1	GSMUA_Achr10P...	AT5G16080.1	21798944
AT3G55840.1	GSMUA_Achr6P16980_001	AT5G16080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28920_001	Banana	cytosol	69.98	81.73
GSMUA_Achr10P...	Banana	nucleus	69.98	75.4
CDY04614	Canola	cytosol	11.21	64.63
CDX68585	Canola	cytosol	11.21	64.63
CDX72167	Canola	cytosol	10.78	62.2
Os01t0855600-01	Rice	plasma membrane	58.14	58.02
TraesCS3D01G361800.1	Wheat	cytosol	56.66	57.39
TraesCS3A01G368800.1	Wheat	cytosol	56.66	57.39
HORVU3Hr1G084830.1	Barley	cytosol	56.66	57.39
KXG33721	Sorghum	plastid	56.87	57.36
CDY20507	Canola	cytosol	23.68	56.85
Zm00001d042811_P001	Maize	cytosol	55.81	56.41
TraesCS3B01G400800.1	Wheat	cytosol, mitochondrion, plastid	55.6	56.32
Zm00001d012321_P001	Maize	plastid	55.39	55.27
HORVU3Hr1G111690.1	Barley	cytosol	15.64	54.81
CDY24933	Canola	cytosol	47.15	52.84
VIT_13s0067g00260.t01	Wine grape	cytosol, nucleus, plastid, vacuole	52.22	51.89
Bra000158.1-P	Field mustard	cytosol, nucleus, vacuole	46.09	51.42
KRG97765	Soybean	plastid	48.84	51.22
CDY70017	Canola	cytosol	45.24	50.95
CDY60990	Canola	cytosol, nucleus, plastid, vacuole	45.45	50.83
Bra004994.1-P	Field mustard	cytosol	44.61	50.48
Bra017040.1-P	Field mustard	cytosol	44.61	50.12
CDY61713	Canola	cytosol	44.61	50.0
KRH31120	Soybean	nucleus	47.99	49.89
CDY07047	Canola	cytosol	44.4	49.88
CDX74813	Canola	cytosol	44.19	49.88
CDY27261	Canola	cytosol	44.4	49.41
CDX72197	Canola	cytosol	44.4	49.41
AT2G40000.1	Thale cress	cytosol	45.24	49.2
AT3G55840.1	Thale cress	cytosol, plastid	44.4	49.07
Bra007195.1-P	Field mustard	cytosol	43.76	48.71
KRH73164	Soybean	cytosol	40.38	43.71
KRH14977	Soybean	plastid	42.07	42.7

Protein Annotations

KEGG:00380+1.13.11.11	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019441	GO:GO:0020037
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr11G24120_001	EnsemblPlants:GSMUA_Achr11P24120_001	EnsemblPlants:GSMUA_Achr11T24120_001	InterPro:HSPRO1/HSPRO2	InterPro:HSPRO1_N
InterPro:Hs1pro-1_C	UniProt:M0RUZ2	PFAM:PF07014	PFAM:PF07231	PANTHER:PTHR34795	SUPFAM:SSF140959
InterPro:Trp/Indoleamine_2_3_dOase-like	UniParc:UPI000294F9E7	SEG:seg	:	:	:

Description

hs1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G24120_001]

Coordinates

chr11:-:23786717..23793696

Molecular Weight (calculated)

52632.0 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.316

Length

473 amino acids

Sequence
(BLAST)

001: MAASEISARS SPAPSNPKPF PSKSAAAPRG HDASAIVAYE HYLRLPELAK LWSSKDFPQW ADESILKPAL QGLEITFRFI SLALSDPRPY ANHREWKRRL
101: ESLAARQVEL IATLCEEDGG APIADLSSVV SRTSEKSLLP RLATWEKSED VASKILFQIE SQMQRCRFTL GLGEPNLAGK PTIEYDLVVR PSDLHALKRS
201: PGGSKDAKDH EDQALCTIQQ ILESWLFAAR ELLARIEQRM DAKDWVQAGS DCWLLERVWK LLSEVEDLHL LMDPDDFLRL KSQLGIKATS GSEALCLRST
301: ALLQVTSSCK DLKRTVPWIL GVEADPNGGP RVQDAAMRLF HSRRRGEGDN LGKINLLQAL QAVEAALKRF FFAYRQVVAA VMGSLETSGN RAVYAPSEAL
401: DSLSQMFLEP PYFPSLDAAK TFLGDFWQTD LSRSGRKEKR GCFAAKIPIS VYNTVGNILP TPKTPKNKDP KFR

Best Arabidopsis Sequence Match ( AT2G40000.1 )
(BLAST)

001: MVDMDWKRKM VSSDLPNSPK LSSKLHVTIP SPFKIVPVSS PISCSAPALC SAYELYLRLP ELRKLWSSRD FPQWTSEPIL KPALQALEIS FRLVFAVCSD
101: TRPYINHREW NRRLDSLITK QIQLVAAICE DEEEEGISAE APVGGGRSSL SLLPQLATWR RSEALGKKIL YTIDNEMSRC KYTLGLGEQN IAGKPNLRYD
201: AICRPNEIYS LKDNPYADHI DNHENQTLYI IHQILESWIY ASGNLLNRIV SSIEEEKFGK ASNDVYLLEK IWKILAEIED LHMLMDPEDF LKLKKQLQIK
301: STGKNDAFCF RSKGLVEMMK MSKDLRQKVP AVLAVEVDPT GGPRLQEAAM KLYARKTECD KIHLLQGMQA VEAAAKSFFF GYRQLVAAMM GSAEMNATAS
401: QESCDSLSQI FMEPTYFPSL DAAKTFLGEF WSHLG

Arabidopsis Description

HSPRO2Nematode resistance protein-like HSPRO2 [Source:UniProtKB/Swiss-Prot;Acc:O04203]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.