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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G084830.1
HORVU3Hr1G111690.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU4Hr1G062060.1
HORVU5Hr1G124410.12
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40000.1 HORVU5Hr1G124410.12 AT1G09020.1 17028154
AT3G55840.1 HORVU5Hr1G124410.12 AT1G09020.1 17028154
AT3G55840.1 HORVU0Hr1G018470.1 AT1G71230.1 21798944
AT3G55840.1 HORVU0Hr1G025410.1 AT1G71230.1 21798944
AT3G55840.1 HORVU1Hr1G008160.1 AT1G71230.1 21798944
AT3G55840.1 HORVU2Hr1G056160.5 AT1G71230.1 21798944
AT3G55840.1 HORVU2Hr1G067660.1 AT1G71230.1 21798944
AT3G55840.1 HORVU2Hr1G112000.1 AT1G71230.1 21798944
AT3G55840.1 HORVU3Hr1G021300.1 AT1G71230.1 21798944
AT3G55840.1 HORVU3Hr1G054660.1 AT1G71230.1 21798944
AT3G55840.1 HORVU3Hr1G113750.1 AT1G71230.1 21798944
AT3G55840.1 HORVU4Hr1G047410.2 AT1G71230.1 21798944
AT3G55840.1 HORVU4Hr1G048730.1 AT1G71230.1 21798944
AT3G55840.1 HORVU6Hr1G023630.1 AT1G71230.1 21798944
AT3G55840.1 HORVU7Hr1G078010.1 AT1G71230.1 21798944
AT3G55840.1 HORVU3Hr1G084830.1 AT3G55840.1 21798944
AT3G55840.1 HORVU3Hr1G111690.1 AT3G55840.1 21798944
AT3G55840.1 HORVU4Hr1G062060.1 AT5G16080.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33721 Sorghum plastid 85.22 84.86
HORVU3Hr1G111690.1 Barley cytosol 23.98 82.96
Os01t0855600-01 Rice plasma membrane 83.73 82.49
Zm00001d042811_P001 Maize cytosol 82.44 82.27
Zm00001d012321_P001 Maize plastid 79.02 77.85
GSMUA_Achr5P28920_001 Banana cytosol 51.18 59.01
GSMUA_Achr10P... Banana nucleus 54.6 58.09
CDX68585 Canola cytosol 10.06 57.32
CDY04614 Canola cytosol 10.06 57.32
GSMUA_Achr11P... Banana plastid 57.39 56.66
CDX72167 Canola cytosol 9.64 54.88
CDY20507 Canola cytosol 22.91 54.31
VIT_13s0067g00260.t01 Wine grape cytosol, nucleus, plastid, vacuole 53.96 52.94
Bra000158.1-P Field mustard cytosol, nucleus, vacuole 44.33 48.82
CDY24933 Canola cytosol 43.68 48.34
CDY60990 Canola cytosol, nucleus, plastid, vacuole 43.47 47.99
AT3G55840.1 Thale cress cytosol, plastid 43.9 47.9
KRG97765 Soybean plastid 45.61 47.23
CDY70017 Canola cytosol 42.4 47.14
CDY27261 Canola cytosol 42.83 47.06
CDX72197 Canola cytosol 42.61 46.82
Bra007195.1-P Field mustard cytosol 42.4 46.59
Bra004994.1-P Field mustard cytosol 41.33 46.17
KRH31120 Soybean nucleus 44.97 46.15
CDX74813 Canola cytosol 41.33 46.06
AT2G40000.1 Thale cress cytosol 42.61 45.75
Bra017040.1-P Field mustard cytosol 40.26 44.66
CDY07047 Canola cytosol 40.04 44.42
CDY61713 Canola cytosol 40.04 44.31
KRH73164 Soybean cytosol 37.9 40.5
KRH14977 Soybean plastid 40.26 40.34
Protein Annotations
KEGG:00380+1.13.11.11MapMan:35.1UniProt:A0A287M160GO:GO:0003674GO:GO:0005488GO:GO:0006950
GO:GO:0006952GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0019441
GO:GO:0020037GO:GO:0046872EnsemblPlantsGene:HORVU3Hr1G084830EnsemblPlants:HORVU3Hr1G084830.1InterPro:HSPRO1/HSPRO2InterPro:HSPRO1_N
InterPro:Hs1pro-1_CPFAM:PF07014PFAM:PF07231PANTHER:PTHR34795SUPFAM:SSF140959InterPro:Trp/Indoleamine_2_3_dOase-like
UniParc:UPI000B47DE82SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:+:609383869..609386186
Molecular Weight (calculated)
51392.5 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.163
Length
467 amino acids
Sequence
(BLAST)
001: MATTKLSPLS PVRPDDKRRA PAASVVLKVQ DSSAAEAYEQ YLRLPELSRL WKGACCPGWT DEGLVKPALQ ALEITFRFVS VALSDPRGYA SRRELARRLE
101: SLAAREVEVV AALCEGDRGA PLAELSASEG VLPRERSASE VWQLPGSAAA VVCHVSEASL LPRLAAWDKS ETLAAKIKYA IESQMQGCAF SLGLGEPNLA
201: GKPVLEYDRV VQPHELHALK PRVAPEPKTG YRNRENEALF TIHQILESWL CAASQLLTRL NNRIEAKDWE AAASDCWILE RIWKLLADIE DLHLLMDPDD
301: FLRLKSQLAI RSAPDGTDAS FCFRSRALLH AANATRDIKK LVPWVIGVEA DPNGGPRVQE AAMRLYHGRR RGEGEDAGKI ELLQAFQAVE AAVRRFFFAY
401: RQVVAAVCGT AEASGNRPLF VPVEGTDPLS QMFLEPPYFP SLDAAKTFLA DYWVQHMAAA SVPSGRS
Best Arabidopsis Sequence Match ( AT3G55840.1 )
(BLAST)
001: MADLDLQRKM VSPKLHVTIP EPCKLSSVSS PISSSSSAAC SAYELYLRLP ELRNLWSSLY FPHWISEPVL KPALQALEIT FRLILTVASD TRPYINRREW
101: IRRLDSLTTS QIKIVAAICG DEDNYEENVS AAPVSNGWSS LSLLSEIATC RTSESVGQKI LSTIENEMRW CKYTLGLGEP NLAGKPYLQY DAVCLPEELH
201: SLKNNPYADH IENQENQMLY TSHQILESWI YVSVNLLYRI ESRIEEGKFE KASSDVYLLE RIWKLLSEIE DLHILMDPED FLKVKKQLQI KSTFPNDAFC
301: FRSKGLVEMA KMSKELRQKV PAVLEVEVDP TGGPRLQEAA MKLYSRKTEY EKIHLLQGMQ AVESAAKRFF FGYQKLVAAM IGNAEANANR TVANHESYDS
401: LTQVFMEPPY YPSLDAAKTF LGEFWSQL
Arabidopsis Description
HSPRO1Nematode resistance protein-like HSPRO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY61]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.