Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04614 | Canola | cytosol | 100.0 | 100.0 |
| CDX72167 | Canola | cytosol | 97.56 | 97.56 |
| CDY20507 | Canola | cytosol | 93.9 | 39.09 |
| HORVU3Hr1G111690.1 | Barley | cytosol | 35.37 | 21.48 |
| CDY70017 | Canola | cytosol | 95.12 | 18.57 |
| CDX74813 | Canola | cytosol | 93.9 | 18.38 |
| CDY60990 | Canola | cytosol, nucleus, plastid, vacuole | 80.49 | 15.6 |
| CDY24933 | Canola | cytosol | 79.27 | 15.4 |
| AT2G40000.1 | Thale cress | cytosol | 78.05 | 14.71 |
| CDY61713 | Canola | cytosol | 70.73 | 13.74 |
| CDY07047 | Canola | cytosol | 69.51 | 13.54 |
| CDX72197 | Canola | cytosol | 65.85 | 12.71 |
| CDY27261 | Canola | cytosol | 65.85 | 12.71 |
| KRG97765 | Soybean | plastid | 62.2 | 11.31 |
| GSMUA_Achr11P... | Banana | plastid | 64.63 | 11.21 |
| KRH31120 | Soybean | nucleus | 60.98 | 10.99 |
| VIT_13s0067g00260.t01 | Wine grape | cytosol, nucleus, plastid, vacuole | 62.2 | 10.71 |
| GSMUA_Achr10P... | Banana | nucleus | 57.32 | 10.71 |
| HORVU3Hr1G084830.1 | Barley | cytosol | 57.32 | 10.06 |
| TraesCS3A01G368800.1 | Wheat | cytosol | 57.32 | 10.06 |
| TraesCS3B01G400800.1 | Wheat | cytosol, mitochondrion, plastid | 57.32 | 10.06 |
| Os01t0855600-01 | Rice | plasma membrane | 57.32 | 9.92 |
| TraesCS3D01G361800.1 | Wheat | cytosol | 56.1 | 9.85 |
| KRH73164 | Soybean | cytosol | 52.44 | 9.84 |
| KRH14977 | Soybean | plastid | 53.66 | 9.44 |
| Zm00001d042811_P001 | Maize | cytosol | 51.22 | 8.97 |
| KXG33721 | Sorghum | plastid | 51.22 | 8.96 |
| Zm00001d012321_P001 | Maize | plastid | 50.0 | 8.65 |
| GSMUA_Achr5P28920_001 | Banana | cytosol | 32.93 | 6.67 |
Protein Annotations
| EnsemblPlants:CDX68585 | EnsemblPlantsGene:GSBRNA2T00130221001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019441 | GO:GO:0020037 | GO:GO:0046872 | InterPro:HSPRO1/HSPRO2 |
| InterPro:Hs1pro-1_C | InterPro:Trp/Indoleamine_2_3_dOase-like | KEGG:00380+1.13.11.11 | PANTHER:PTHR34795 | PFAM:PF07014 | ProteinID:CDX68585 |
| ProteinID:CDX68585.1 | SUPFAM:SSF140959 | UniParc:UPI0004EDC2FB | MapMan:35.1 | : | : |
Description
BnaC01g08680D
Coordinates
chrLK031789:-:1796..2044
Molecular Weight (calculated)
9286.2 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.085
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MRLYTRKGEE CDKIHLLQGM QGVEAVAKRF FFAYKQVVAA VMGSAETNTE CDSVRQIFME PAYFPSLDAA KTFLGEFWSH VG
001: MVDMDWKRKM VSSDLPNSPK LSSKLHVTIP SPFKIVPVSS PISCSAPALC SAYELYLRLP ELRKLWSSRD FPQWTSEPIL KPALQALEIS FRLVFAVCSD
101: TRPYINHREW NRRLDSLITK QIQLVAAICE DEEEEGISAE APVGGGRSSL SLLPQLATWR RSEALGKKIL YTIDNEMSRC KYTLGLGEQN IAGKPNLRYD
201: AICRPNEIYS LKDNPYADHI DNHENQTLYI IHQILESWIY ASGNLLNRIV SSIEEEKFGK ASNDVYLLEK IWKILAEIED LHMLMDPEDF LKLKKQLQIK
301: STGKNDAFCF RSKGLVEMMK MSKDLRQKVP AVLAVEVDPT GGPRLQEAAM KLYARKTECD KIHLLQGMQA VEAAAKSFFF GYRQLVAAMM GSAEMNATAS
401: QESCDSLSQI FMEPTYFPSL DAAKTFLGEF WSHLG
101: TRPYINHREW NRRLDSLITK QIQLVAAICE DEEEEGISAE APVGGGRSSL SLLPQLATWR RSEALGKKIL YTIDNEMSRC KYTLGLGEQN IAGKPNLRYD
201: AICRPNEIYS LKDNPYADHI DNHENQTLYI IHQILESWIY ASGNLLNRIV SSIEEEKFGK ASNDVYLLEK IWKILAEIED LHMLMDPEDF LKLKKQLQIK
301: STGKNDAFCF RSKGLVEMMK MSKDLRQKVP AVLAVEVDPT GGPRLQEAAM KLYARKTECD KIHLLQGMQA VEAAAKSFFF GYRQLVAAMM GSAEMNATAS
401: QESCDSLSQI FMEPTYFPSL DAAKTFLGEF WSHLG
Arabidopsis Description
HSPRO2Nematode resistance protein-like HSPRO2 [Source:UniProtKB/Swiss-Prot;Acc:O04203]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.