Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- extracellular 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72197 | Canola | cytosol | 84.11 | 84.71 |
| CDY27261 | Canola | cytosol | 83.64 | 84.24 |
| Bra007195.1-P | Field mustard | cytosol | 82.94 | 83.53 |
| AT2G40000.1 | Thale cress | cytosol | 73.36 | 72.18 |
| VIT_13s0067g00260.t01 | Wine grape | cytosol, nucleus, plastid, vacuole | 59.58 | 53.57 |
| KRG97765 | Soybean | plastid | 53.27 | 50.55 |
| KRH31120 | Soybean | nucleus | 53.74 | 50.55 |
| KRH73164 | Soybean | cytosol | 49.3 | 48.28 |
| GSMUA_Achr10P... | Banana | nucleus | 48.6 | 47.38 |
| KRH14977 | Soybean | plastid | 50.7 | 46.57 |
| GSMUA_Achr5P28920_001 | Banana | cytosol | 43.22 | 45.68 |
| GSMUA_Achr11P... | Banana | plastid | 49.07 | 44.4 |
| TraesCS3D01G361800.1 | Wheat | cytosol | 48.36 | 44.33 |
| KXG33721 | Sorghum | plastid | 48.36 | 44.14 |
| HORVU3Hr1G084830.1 | Barley | cytosol | 47.9 | 43.9 |
| TraesCS3A01G368800.1 | Wheat | cytosol | 47.9 | 43.9 |
| TraesCS3B01G400800.1 | Wheat | cytosol, mitochondrion, plastid | 47.9 | 43.9 |
| HORVU3Hr1G111690.1 | Barley | cytosol | 13.79 | 43.7 |
| Zm00001d042811_P001 | Maize | cytosol | 47.66 | 43.59 |
| Zm00001d012321_P001 | Maize | plastid | 47.2 | 42.62 |
| Os01t0855600-01 | Rice | plasma membrane | 46.96 | 42.41 |
Protein Annotations
| KEGG:00380+1.13.11.11 | MapMan:35.1 | EntrezGene:824750 | ProteinID:AEE79447.1 | ArrayExpress:AT3G55840 | EnsemblPlantsGene:AT3G55840 |
| RefSeq:AT3G55840 | TAIR:AT3G55840 | RefSeq:AT3G55840-TAIR-G | EnsemblPlants:AT3G55840.1 | TAIR:AT3G55840.1 | EMBL:AY034950 |
| EMBL:AY070026 | EMBL:AY085394 | Unigene:At.70251 | ProteinID:CAB87838.1 | EMBL:DQ132634 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019441 | GO:GO:0020037 | GO:GO:0046872 | InterPro:HSPRO1/HSPRO2 | InterPro:HSPRO1_N | InterPro:Hs1pro-1_C |
| RefSeq:NP_191143.1 | PFAM:PF07014 | PFAM:PF07231 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR34795 | UniProt:Q9LY61 | SUPFAM:SSF140959 | InterPro:Trp/Indoleamine_2_3_dOase-like |
| UniParc:UPI000009FD6C | SEG:seg | : | : | : | : |
Description
HSPRO1Nematode resistance protein-like HSPRO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY61]
Coordinates
chr3:-:20716995..20718866
Molecular Weight (calculated)
48790.5 Da
IEP (calculated)
5.529
GRAVY (calculated)
-0.264
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLDLQRKM VSPKLHVTIP EPCKLSSVSS PISSSSSAAC SAYELYLRLP ELRNLWSSLY FPHWISEPVL KPALQALEIT FRLILTVASD TRPYINRREW
101: IRRLDSLTTS QIKIVAAICG DEDNYEENVS AAPVSNGWSS LSLLSEIATC RTSESVGQKI LSTIENEMRW CKYTLGLGEP NLAGKPYLQY DAVCLPEELH
201: SLKNNPYADH IENQENQMLY TSHQILESWI YVSVNLLYRI ESRIEEGKFE KASSDVYLLE RIWKLLSEIE DLHILMDPED FLKVKKQLQI KSTFPNDAFC
301: FRSKGLVEMA KMSKELRQKV PAVLEVEVDP TGGPRLQEAA MKLYSRKTEY EKIHLLQGMQ AVESAAKRFF FGYQKLVAAM IGNAEANANR TVANHESYDS
401: LTQVFMEPPY YPSLDAAKTF LGEFWSQL
101: IRRLDSLTTS QIKIVAAICG DEDNYEENVS AAPVSNGWSS LSLLSEIATC RTSESVGQKI LSTIENEMRW CKYTLGLGEP NLAGKPYLQY DAVCLPEELH
201: SLKNNPYADH IENQENQMLY TSHQILESWI YVSVNLLYRI ESRIEEGKFE KASSDVYLLE RIWKLLSEIE DLHILMDPED FLKVKKQLQI KSTFPNDAFC
301: FRSKGLVEMA KMSKELRQKV PAVLEVEVDP TGGPRLQEAA MKLYSRKTEY EKIHLLQGMQ AVESAAKRFF FGYQKLVAAM IGNAEANANR TVANHESYDS
401: LTQVFMEPPY YPSLDAAKTF LGEFWSQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.