Factsheet for HORVU4Hr1G066680.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020261	Potato	extracellular, plasma membrane, vacuole	43.24	82.05
TraesCS4A01G153100.1	Wheat	mitochondrion, plasma membrane	42.57	81.29
Solyc09g055950.1.1	Tomato	plastid	39.53	80.14
KRH54903	Soybean	plasma membrane	44.59	78.57
Solyc05g021190.1.1	Tomato	extracellular	22.97	76.4
KRH62235	Soybean	endoplasmic reticulum, extracellular, vacuole	36.49	72.48
HORVU2Hr1G121790.2	Barley	cytosol, plasma membrane, vacuole	84.12	70.54
TraesCS2D01G572800.1	Wheat	extracellular, plasma membrane, vacuole	36.82	70.32
HORVU3Hr1G066830.2	Barley	extracellular	12.84	69.09
KRH76460	Soybean	cytosol	57.09	67.87
PGSC0003DMT400016094	Potato	endoplasmic reticulum, extracellular, vacuole	21.28	52.5
HORVU6Hr1G046850.1	Barley	cytosol	26.69	48.77
HORVU2Hr1G061990.1	Barley	cytosol	14.53	43.43
VIT_12s0055g00080.t01	Wine grape	cytosol	23.99	42.52
PGSC0003DMT400074870	Potato	extracellular	15.54	31.94

Protein Annotations

MapMan:1.1.1.2.1.2	Gene3D:1.20.85.10	UniProt:A0A287PF83	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009772	GO:GO:0009987	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0019684	GO:GO:0045156	EnsemblPlantsGene:HORVU4Hr1G066680	EnsemblPlants:HORVU4Hr1G066680.2
InterPro:IPR036854	PFAM:PF00124	PRINTS:PR00256	ScanProsite:PS00244	PANTHER:PTHR33149	PANTHER:PTHR33149:SF7
InterPro:Photo_II_D1/D2_sf	InterPro:Photo_RC_L/M	SUPFAM:SSF81483	TMHMM:TMhelix	UniParc:UPI000B4666DF	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:554696053..554698478

Molecular Weight (calculated)

33427.5 Da

IEP (calculated)

6.501

GRAVY (calculated)

0.529

Length

296 amino acids

Sequence
(BLAST)

001: MVWPIALSFC LFRFRGWFTG TTFVTSWYTH GLASSYLEGC NFLTAAVSTP ANSLAHSLLL LWGPEAQGDF TRWCQLGGLW TFVALHGAFA LIGFMLRQFE
101: LARSVELRPY NAISFSRPIV VFVSVFLIYP LGQFGWFFAP SFGVAAIFRF ILFFQGFHNW TLNPFHMMGV AGVLGAALLC AIHGATVENT LFEDGDGANT
201: FRAFNPTQAE ETYSMVTANR FLSQIFADDF SNKHWLHFFM LFVPITGLWM SAIGVVVLAL NLRAYDFVSQ EIRAAEDPEF ETFYTKNILL TRMFVC

Best Arabidopsis Sequence Match ( ATCG00270.1 )
(BLAST)

001: MTIALGKFTK DEKDLFDIMD DWLRRDRFVF VGWSGLLLFP CAYFALGGWF TGTTFVTSWY THGLASSYLE GCNFLTAAVS TPANSLAHSL LLLWGPEAQG
101: DFTRWCQLGG LWAFVALHGA FALIGFMLRQ FELARSVQLR PYNAIAFSGP IAVFVSVFLI YPLGQSGWFF APSFGVAAIF RFILFFQGFH NWTLNPFHMM
201: GVAGVLGAAL LCAIHGATVE NTLFEDGDGA NTFRAFNPTQ AEETYSMVTA NRFWSQIFGV AFSNKRWLHF FMLFVPVTGL WMSALGVVGL ALNLRAYDFV
301: SQEIRAAEDP EFETFYTKNI LLNEGIRAWM AAQDQPHENL IFPEEVLPRG NAL

Arabidopsis Description

PSBDPhotosystem II D2 protein [Source:UniProtKB/Swiss-Prot;Acc:P56761]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.