Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0597g00020.t01 | Wine grape | cytosol | 37.14 | 43.14 |
| GSMUA_Achr4P26110_001 | Banana | cytosol | 30.86 | 32.73 |
| Os02t0639700-01 | Rice | nucleus | 26.86 | 28.89 |
| HORVU2Hr1G098380.15 | Barley | cytosol, nucleus, plastid | 13.9 | 28.74 |
| Zm00001d051245_P001 | Maize | nucleus | 25.14 | 26.45 |
| TraesCS2D01G415100.1 | Wheat | nucleus | 26.48 | 26.38 |
| TraesCS2A01G417900.3 | Wheat | nucleus | 26.48 | 26.33 |
| OQU85378 | Sorghum | cytosol | 24.95 | 26.2 |
| TraesCS2B01G436800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 26.29 | 26.19 |
| HORVU2Hr1G098290.4 | Barley | cytosol, nucleus | 13.14 | 24.56 |
| KRG98291 | Soybean | nucleus | 21.52 | 22.2 |
| KRH30312 | Soybean | nucleus | 20.76 | 21.29 |
| TraesCS2B01G206400.1 | Wheat | mitochondrion | 19.43 | 11.82 |
Protein Annotations
| EMBL:ACUP02008356 | EnsemblPlants:KRH21455 | EnsemblPlantsGene:GLYMA_13G240200 | EntrezGene:100808122 | InterPro:DUF1771 | PANTHER:PTHR13308 |
| PANTHER:PTHR13308:SF37 | PFAM:PF08590 | ProteinID:KRH21455 | ProteinID:KRH21455.1 | SEG:seg | SMART:SM01162 |
| UniParc:UPI00023CF587 | UniProt:A0A0R0H4X6 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:35022604..35028147
Molecular Weight (calculated)
59333.0 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.729
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MYWASPKFPL LSSLLTVTPA QHRPPRLIEM EVSGQNIVKC DEEKALKCLL DAFGSVFSLE EIASAYCKAS RNADLAGEML YEMKGSSSGS STTLDSSNAD
101: VMTEGSSESS DAYSLENSFQ ERKTSRPKGR PISMGTVSSV IGKDYGRPAR SANGSFASVK PTKLDAKSLP MTGIWREKGK ADVSISKHDQ LHQDMEDFLF
201: KMLGEGFQLD RNMIRQVLDT CGYDIQKSLR KLLDRSNMAS GKRTAVVGDS AGRFTDMKPK SEAPSTQRKS QDLNYTRGDG NIASTKEAEF QQKQKHNLQK
301: AVLSTLFNYQ GHSEEAPKRT VKDFNKKSRY GHVVFEPPKD FPEEFDFDMD FSRQENIDDP EDEEEYKNVR RAVKEYRGTM NEYYKAAVDS FAKGDQMKAE
401: KLLEQGQFFL RKAHDADEES NKMILETRNT EAQEMVLDLR DHGSKEAIRL LKCHLSSLSG IPSFEYLKVI VDANDKDNTK GSRRRLRVFK LLEQESITWV
501: EGETADTILI RLASIERKRL SFVKT
101: VMTEGSSESS DAYSLENSFQ ERKTSRPKGR PISMGTVSSV IGKDYGRPAR SANGSFASVK PTKLDAKSLP MTGIWREKGK ADVSISKHDQ LHQDMEDFLF
201: KMLGEGFQLD RNMIRQVLDT CGYDIQKSLR KLLDRSNMAS GKRTAVVGDS AGRFTDMKPK SEAPSTQRKS QDLNYTRGDG NIASTKEAEF QQKQKHNLQK
301: AVLSTLFNYQ GHSEEAPKRT VKDFNKKSRY GHVVFEPPKD FPEEFDFDMD FSRQENIDDP EDEEEYKNVR RAVKEYRGTM NEYYKAAVDS FAKGDQMKAE
401: KLLEQGQFFL RKAHDADEES NKMILETRNT EAQEMVLDLR DHGSKEAIRL LKCHLSSLSG IPSFEYLKVI VDANDKDNTK GSRRRLRVFK LLEQESITWV
501: EGETADTILI RLASIERKRL SFVKT
001: MSKIASSSNS DPDSRSLQVL LDTFGSRFSL DDIAAAYCQA SQNVDVAGEI LSAMAEKTPQ CDQVEMKTAT SKPTQVYVPK EVPRQEDSKA KVWRPKRNSI
101: SNGTVSSVIG KEYARTRPIS NAPKEATKPL KINSRDIPET EIWSEEMRKS NEGKISRAPT DVEEFIVKML GEGFQASQEV IHQVLGVCGY DVKKSTEKLL
201: DFSDTKKYAD VGISNEVMSK VDPQRQSTSC NQMELQKISQ SVGARTFTGS QEGRNAKNGL EKEVLEALFS GAERYVDKPK VTRHFGERRP GVAGRPVFKP
301: LEDPFQERVV AVKQSSNTSK EDDDENEFKA HRKAVREHLN QMKEYYGAAA EAFSKGETER AHRLVEKGHF FGQKAREADD KSVAKMIDVN QEDDSTYEED
401: EVVTVNMNEH EAKEALRLLK RQLIYFSGIS SFKYLRVQLG EKKEDFKSKR KHIVKLLEGE SIPWTEEDGG LVIMIRVDEI DPKKLSFAKK
101: SNGTVSSVIG KEYARTRPIS NAPKEATKPL KINSRDIPET EIWSEEMRKS NEGKISRAPT DVEEFIVKML GEGFQASQEV IHQVLGVCGY DVKKSTEKLL
201: DFSDTKKYAD VGISNEVMSK VDPQRQSTSC NQMELQKISQ SVGARTFTGS QEGRNAKNGL EKEVLEALFS GAERYVDKPK VTRHFGERRP GVAGRPVFKP
301: LEDPFQERVV AVKQSSNTSK EDDDENEFKA HRKAVREHLN QMKEYYGAAA EAFSKGETER AHRLVEKGHF FGQKAREADD KSVAKMIDVN QEDDSTYEED
401: EVVTVNMNEH EAKEALRLLK RQLIYFSGIS SFKYLRVQLG EKKEDFKSKR KHIVKLLEGE SIPWTEEDGG LVIMIRVDEI DPKKLSFAKK
Arabidopsis Description
SDE5Putative nuclear RNA export factor SDE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.