Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G206400.1 | Wheat | mitochondrion | 75.59 | 22.25 |
| GSMUA_Achr4P26110_001 | Banana | cytosol | 40.94 | 21.01 |
| Bra027247.1-P | Field mustard | nucleus | 29.92 | 15.73 |
| CDX97665 | Canola | nucleus | 29.92 | 15.73 |
| CDX98557 | Canola | nucleus | 29.53 | 15.18 |
| CDY21839 | Canola | nucleus | 28.35 | 15.16 |
| Bra021108.1-P | Field mustard | nucleus | 28.35 | 15.13 |
| CDY20114 | Canola | nucleus | 28.35 | 15.13 |
| AT3G15390.1 | Thale cress | nucleus | 27.56 | 14.29 |
| VIT_10s0597g00020.t01 | Wine grape | cytosol | 24.8 | 13.94 |
| KRH21455 | Soybean | vacuole | 28.74 | 13.9 |
| Solyc07g063240.2.1 | Tomato | cytosol | 24.41 | 11.95 |
| PGSC0003DMT400032412 | Potato | cytosol | 23.62 | 10.95 |
| HORVU3Hr1G030600.8 | Barley | mitochondrion | 25.59 | 9.45 |
| HORVU2Hr1G098290.4 | Barley | cytosol, nucleus | 1.57 | 1.42 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G098380.15 | EnsemblPlantsGene:HORVU2Hr1G098380 | InterPro:DUF1771 | PANTHER:PTHR13308 | PANTHER:PTHR13308:SF37 | PFAM:PF08590 |
| SMART:SM01162 | UniParc:UPI000B46F230 | UniProt:A0A287J3M5 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:682607369..682610470
Molecular Weight (calculated)
29076.6 Da
IEP (calculated)
8.607
GRAVY (calculated)
-0.795
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: HLKIWDTAVE SSFSMGSCLG SQSTSRSQIT PGELLESIFT APERSEEEPK VRRYELGANR RRVPDQKPVV KPLEDISPPS TDLPVKIILG SKEPVVRDED
101: DYQNYRKAAK QHWDMMKQYY AKAVDAFREG NKKEAEYLRT EGKNYYMMAR LSAEKSAGEI TKSKQESKNE LCLDLRSQDA ANVANLLRLH LRQLANIPSF
201: ENLRVIIGVD DGTFKMGQRR RKVEKFLEKK SVEWTEDEAN PGTILIPINQ VKDQ
101: DYQNYRKAAK QHWDMMKQYY AKAVDAFREG NKKEAEYLRT EGKNYYMMAR LSAEKSAGEI TKSKQESKNE LCLDLRSQDA ANVANLLRLH LRQLANIPSF
201: ENLRVIIGVD DGTFKMGQRR RKVEKFLEKK SVEWTEDEAN PGTILIPINQ VKDQ
001: MALSTEKLLD FSDTKKYADV GISNEVMSKV DPQRQSTSCN QMELQKISQS VGARTFTGSQ EGRNAKNGLE KEVLEALFSG AERYVDKPKV TRHFGERRPG
101: VAGRPVFKPL EDPFQERVVA VKQSSNTSKE DDDENEFKAH RKAVREHLNQ MKEYYGAAAE AFSKGETERA HRLVEKGHFF GQKAREADDK SVAKMIDVNQ
201: EDDSTYEEDE VVTVNMNEHE AKEALRLLKR QLIYFSGISS FKYLRVQLGE KKEDFKSKRK HIVKLLEGES IPWTEEDGGL VIMIRVDEID PKKLSFAKK
101: VAGRPVFKPL EDPFQERVVA VKQSSNTSKE DDDENEFKAH RKAVREHLNQ MKEYYGAAAE AFSKGETERA HRLVEKGHFF GQKAREADDK SVAKMIDVNQ
201: EDDSTYEEDE VVTVNMNEHE AKEALRLLKR QLIYFSGISS FKYLRVQLGE KKEDFKSKRK HIVKLLEGES IPWTEEDGGL VIMIRVDEID PKKLSFAKK
Arabidopsis Description
SDE5Putative nuclear RNA export factor SDE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.