Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g063240.2.1 | Tomato | cytosol | 89.05 | 94.03 |
| CDY21839 | Canola | nucleus | 30.84 | 35.58 |
| CDX98557 | Canola | nucleus | 31.75 | 35.22 |
| Bra027247.1-P | Field mustard | nucleus | 31.02 | 35.2 |
| CDX97665 | Canola | nucleus | 31.02 | 35.2 |
| Bra021108.1-P | Field mustard | nucleus | 29.93 | 34.45 |
| AT3G15390.1 | Thale cress | nucleus | 30.66 | 34.29 |
| CDY20114 | Canola | nucleus | 29.56 | 34.03 |
| GSMUA_Achr4P26110_001 | Banana | cytosol | 29.74 | 32.93 |
| Os02t0639700-01 | Rice | nucleus | 24.64 | 27.66 |
| Zm00001d051245_P001 | Maize | nucleus | 23.72 | 26.05 |
| HORVU2Hr1G098290.4 | Barley | cytosol, nucleus | 13.14 | 25.62 |
| TraesCS2B01G436800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 24.45 | 25.43 |
| TraesCS2D01G415100.1 | Wheat | nucleus | 24.45 | 25.43 |
| OQU85378 | Sorghum | cytosol | 23.18 | 25.4 |
| TraesCS2A01G417900.3 | Wheat | nucleus | 24.45 | 25.38 |
| HORVU2Hr1G098380.15 | Barley | cytosol, nucleus, plastid | 10.95 | 23.62 |
| PGSC0003DMT400010646 | Potato | nucleus | 18.98 | 20.47 |
| TraesCS2B01G206400.1 | Wheat | mitochondrion | 17.52 | 11.12 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400032412 | EnsemblPlantsGene:PGSC0003DMG400012450 | InterPro:DUF1771 | PANTHER:PTHR13308 | PANTHER:PTHR13308:SF37 | PFAM:PF08590 |
| PGSC:PGSC0003DMG400012450 | SEG:seg | SMART:SM01162 | UniParc:UPI0002967960 | UniProt:M1AXE1 | MapMan:35.1 |
Description
ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012450]
Coordinates
chr7:-:53292286..53300263
Molecular Weight (calculated)
60911.4 Da
IEP (calculated)
4.633
GRAVY (calculated)
-0.371
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPPSTILF TDDDSKNLEQ LLDVFGSVVS LDDIAAAYCK AGRNPIIAGD ILGDQKPSSS GTTNSELEEN IEDSVTLTSE FEEVGDSVIS TSESVSEIDA
101: KRAGPRSSKQ KKLSVSMGTV SSMIPKDYLT NRPLITETST RIKPLKLSAD DFLTPELRDE KAPLGAAAMS ETLPSTVEEF LFNMLGSGFS LDRSVIGDVV
201: GQCGYDLNKS MDKLLNMSSS TLGKSDDIIN IGVKKSVESS DFASVASKET SSMTDPAIRS KANEKTKNGL NLSMKEQERY EIQKEVLHAL FDVPATSRYD
301: DVDEVIHPVK EVGKSSRLNL VVDKPLQETL ERQILIRTPQ SDAKNGEEDE ESYEVLRKAV KEYWITMKEY YNAASEAFSK GDHDKARKFL EEGQFFMTKA
401: QVTDEQSSQK LLEISCSSSK EIVTLDLHDL EPKDAVRLLK LQLTSLCGFS SIQYLKILVG ITAEEAKGPR KRLIVCPIEL FFFILCLLES TLDKQKYETD
501: ICKQVLKFLE RDSIPWTEEE NGTVLVIRVD VIDPRKMTFA KKSTARVR
101: KRAGPRSSKQ KKLSVSMGTV SSMIPKDYLT NRPLITETST RIKPLKLSAD DFLTPELRDE KAPLGAAAMS ETLPSTVEEF LFNMLGSGFS LDRSVIGDVV
201: GQCGYDLNKS MDKLLNMSSS TLGKSDDIIN IGVKKSVESS DFASVASKET SSMTDPAIRS KANEKTKNGL NLSMKEQERY EIQKEVLHAL FDVPATSRYD
301: DVDEVIHPVK EVGKSSRLNL VVDKPLQETL ERQILIRTPQ SDAKNGEEDE ESYEVLRKAV KEYWITMKEY YNAASEAFSK GDHDKARKFL EEGQFFMTKA
401: QVTDEQSSQK LLEISCSSSK EIVTLDLHDL EPKDAVRLLK LQLTSLCGFS SIQYLKILVG ITAEEAKGPR KRLIVCPIEL FFFILCLLES TLDKQKYETD
501: ICKQVLKFLE RDSIPWTEEE NGTVLVIRVD VIDPRKMTFA KKSTARVR
001: MSKIASSSNS DPDSRSLQVL LDTFGSRFSL DDIAAAYCQA SQNVDVAGEI LSAMAEKTPQ CDQVEMKTAT SKPTQVYVPK EVPRQEDSKA KVWRPKRNSI
101: SNGTVSSVIG KEYARTRPIS NAPKEATKPL KINSRDIPET EIWSEEMRKS NEGKISRAPT DVEEFIVKML GEGFQASQEV IHQVLGVCGY DVKKSTEKLL
201: DFSDTKKYAD VGISNEVMSK VDPQRQSTSC NQMELQKISQ SVGARTFTGS QEGRNAKNGL EKEVLEALFS GAERYVDKPK VTRHFGERRP GVAGRPVFKP
301: LEDPFQERVV AVKQSSNTSK EDDDENEFKA HRKAVREHLN QMKEYYGAAA EAFSKGETER AHRLVEKGHF FGQKAREADD KSVAKMIDVN QEDDSTYEED
401: EVVTVNMNEH EAKEALRLLK RQLIYFSGIS SFKYLRVQLG EKKEDFKSKR KHIVKLLEGE SIPWTEEDGG LVIMIRVDEI DPKKLSFAKK
101: SNGTVSSVIG KEYARTRPIS NAPKEATKPL KINSRDIPET EIWSEEMRKS NEGKISRAPT DVEEFIVKML GEGFQASQEV IHQVLGVCGY DVKKSTEKLL
201: DFSDTKKYAD VGISNEVMSK VDPQRQSTSC NQMELQKISQ SVGARTFTGS QEGRNAKNGL EKEVLEALFS GAERYVDKPK VTRHFGERRP GVAGRPVFKP
301: LEDPFQERVV AVKQSSNTSK EDDDENEFKA HRKAVREHLN QMKEYYGAAA EAFSKGETER AHRLVEKGHF FGQKAREADD KSVAKMIDVN QEDDSTYEED
401: EVVTVNMNEH EAKEALRLLK RQLIYFSGIS SFKYLRVQLG EKKEDFKSKR KHIVKLLEGE SIPWTEEDGG LVIMIRVDEI DPKKLSFAKK
Arabidopsis Description
SDE5Putative nuclear RNA export factor SDE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.