Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99562 | Soybean | cytosol | 61.27 | 39.73 |
| AT4G12850.1 | Thale cress | cytosol, extracellular, nucleus | 45.07 | 34.78 |
| KRH66221 | Soybean | nucleus | 34.51 | 23.67 |
| KRH56435 | Soybean | nucleus | 40.14 | 23.65 |
| KRH62480 | Soybean | nucleus | 39.44 | 23.24 |
| KRH24623 | Soybean | nucleus | 30.99 | 16.73 |
| KRH29624 | Soybean | nucleus | 31.69 | 15.25 |
| KRH10126 | Soybean | nucleus | 30.28 | 14.63 |
| KRH23208 | Soybean | nucleus | 10.56 | 5.86 |
| KRH10133 | Soybean | nucleus | 10.56 | 5.49 |
Protein Annotations
| MapMan:35.2 | EMBL:ACUP02005350 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | EnsemblPlantsGene:GLYMA_08G342800 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010018 | GO:GO:0042753 |
| GO:GO:0045893 | UniProt:K7LAL1 | EnsemblPlants:KRH46568 | ProteinID:KRH46568 | ProteinID:KRH46568.1 | PFAM:PF03101 |
| PANTHER:PTHR31669 | PANTHER:PTHR31669:SF80 | UniParc:UPI000296C893 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:45828265..45828722
Molecular Weight (calculated)
15811.9 Da
IEP (calculated)
5.722
GRAVY (calculated)
-0.320
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFVVVDSDN GNEAEHSCLE ESTSIFEGVE VQEPYVGMEF DSEEDAREIC CTIMQRRRFG IDGRTLARRL GCNKQGFSPN NMGILGPEKK LRPSAREGCK
101: ATILVKLEKS GKWVVTRFVK DHNHPLIATA NGFSTAVSFL LV
101: ATILVKLEKS GKWVVTRFVK DHNHPLIATA NGFSTAVSFL LV
001: MMTGDLKLDE PYVGLKFESE EEAKDFYVEY SKRLGFVVRM MQRRRSGIDG RTLARRLGCN KQGFGPNNQR SSSSSSSSRE GCKATILVKM EKSGKWVVTR
101: FIKEHNHSLQ FIGSSSYDSF VRFQSLYLWV FLICFAIT
101: FIKEHNHSLQ FIGSSSYDSF VRFQSLYLWV FLICFAIT
Arabidopsis Description
Far-red impaired responsive (FAR1) family protein [Source:TAIR;Acc:AT4G12850]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.