Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56435 | Soybean | nucleus | 95.02 | 95.02 |
| Bra037724.1-P | Field mustard | cytosol | 24.9 | 74.07 |
| CDY23353 | Canola | cytosol | 24.9 | 74.07 |
| CDY30396 | Canola | cytosol | 24.9 | 74.07 |
| AT2G43280.1 | Thale cress | cytosol | 58.51 | 68.45 |
| Bra037723.1-P | Field mustard | nucleus | 54.77 | 66.0 |
| CDY23354 | Canola | cytosol, mitochondrion, plastid | 57.26 | 57.5 |
| CDY30397 | Canola | cytosol, plastid | 56.43 | 53.54 |
| KRG99562 | Soybean | cytosol | 41.49 | 45.66 |
| KRH66221 | Soybean | nucleus | 36.51 | 42.51 |
| KRH46568 | Soybean | cytosol | 23.24 | 39.44 |
| KRH24623 | Soybean | nucleus | 32.78 | 30.04 |
| KRH10126 | Soybean | nucleus | 34.02 | 27.89 |
| KRH29624 | Soybean | nucleus | 31.54 | 25.76 |
| KRH10133 | Soybean | nucleus | 11.62 | 10.26 |
| KRH23208 | Soybean | nucleus | 10.79 | 10.16 |
Protein Annotations
| EntrezGene:100787741 | MapMan:15.5.46 | EMBL:ACUP02002296 | ncoils:Coil | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 |
| EnsemblPlantsGene:GLYMA_04G111200 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010018 | GO:GO:0042753 | GO:GO:0045893 | UniProt:K7KJE4 | ProteinID:KRH62478.1 | ProteinID:KRH62479.1 |
| EnsemblPlants:KRH62480 | ProteinID:KRH62480 | ProteinID:KRH62480.1 | ProteinID:KRH62481.1 | ProteinID:KRH62482.1 | ProteinID:KRH62483.1 |
| PFAM:PF03101 | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF46 | UniParc:UPI0002339ACE | : | : |
Description
hypothetical protein
Coordinates
chr4:+:12284839..12291882
Molecular Weight (calculated)
27895.3 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.693
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQLIDGND EMEVSGDVGL STCEVQMHQE TYEVDPNEGC RVLESSSWGE LGICEDHAIQ EPYEGMEFES EDAAKLFYDE YARRLGFVMR VMSCRRSERD
101: GRILARRLGC NKEGYCVSIR GKFASVRKPR ASTREGCKAM IHIKYDKSGK WVITKFVKDH NHPLVVSPRE ARQTMDEKDK KIQELTAELR LKKRLCATYQ
201: EQLTSFMKIV EEHNEKLSAK IHHVVNNLKE FESIEELLHQ T
101: GRILARRLGC NKEGYCVSIR GKFASVRKPR ASTREGCKAM IHIKYDKSGK WVITKFVKDH NHPLVVSPRE ARQTMDEKDK KIQELTAELR LKKRLCATYQ
201: EQLTSFMKIV EEHNEKLSAK IHHVVNNLKE FESIEELLHQ T
001: MEDEDDPTTK NSNNTDDFAI EPREGIIFES EDAAKMFYDD YSRRLGFVMR VMSCRRSEKD GRILARRFGC NKEGHCVSIR GKFGSVRKPR PSTREGCKAM
101: IHVKYDRSGK WVITKFVKEH NHPLVVSPRE ARHTLDEKDK RIQELTIELR NKKRLCAAYK EQLDAFAKIV EEHSNQIAKK VENVVNNLKE FEHLEHALLR
201: SKQDAI
101: IHVKYDRSGK WVITKFVKEH NHPLVVSPRE ARHTLDEKDK RIQELTIELR NKKRLCAAYK EQLDAFAKIV EEHSNQIAKK VENVVNNLKE FEHLEHALLR
201: SKQDAI
Arabidopsis Description
Far-red impaired responsive (FAR1) family protein [Source:UniProtKB/TrEMBL;Acc:Q84J94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.