Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10133 | Soybean | nucleus | 86.72 | 81.32 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 50.78 | 67.36 |
| GSMUA_Achr5P14700_001 | Banana | cytosol | 29.3 | 16.59 |
| KRG99562 | Soybean | cytosol | 11.33 | 13.24 |
| KRH66221 | Soybean | nucleus | 10.16 | 12.56 |
| KRH56435 | Soybean | nucleus | 10.55 | 11.2 |
| KRH62480 | Soybean | nucleus | 10.16 | 10.79 |
| KRH46568 | Soybean | cytosol | 5.86 | 10.56 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 28.12 | 10.56 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 28.52 | 10.55 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 26.95 | 10.28 |
| KRH24623 | Soybean | nucleus | 10.55 | 10.27 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 27.73 | 10.1 |
| Zm00001d028472_P001 | Maize | nucleus | 26.56 | 9.93 |
| KRH10126 | Soybean | nucleus | 11.33 | 9.86 |
| Os03t0255400-01 | Rice | nucleus | 26.56 | 9.74 |
| KXG39753 | Sorghum | cytosol | 25.78 | 9.43 |
| KRH29624 | Soybean | nucleus | 10.55 | 9.15 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 10.94 | 4.61 |
Protein Annotations
| EntrezGene:100813124 | MapMan:15.5.46 | EMBL:ACUP02008457 | ncoils:Coil | InterPro:FAR1_DNA_bnd_dom | EnsemblPlantsGene:GLYMA_13G344100 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010018 |
| GO:GO:0042753 | GO:GO:0045893 | UniProt:I1M556 | EnsemblPlants:KRH23208 | ProteinID:KRH23208 | ProteinID:KRH23208.1 |
| PFAM:PF03101 | UniParc:UPI000233B0E1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:43522222..43525502
Molecular Weight (calculated)
29648.0 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.820
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHQSGQGFN SDDSDLDMQA EISEKHKKVD EFSKNLELCG SEDEMFVEIE QPLANISTDI EAVEPFIGME FNSREEAREF YIAYGRRVGF TVRIHHNRRS
101: RVNNQVIGQD FVCSKEGFRA KKYVHRRDRV LPPPPATREG CQAMIRLALR DGGKWVVTKF VKEHTHKLMS PSKVPWRGSG KHLVSEDEKD KRIRELSLEL
201: YNERQKCKRR CAAYEEQLNM ILNDLEKHTE HISEKVAAVV RSIREIEEEI SDSDGG
101: RVNNQVIGQD FVCSKEGFRA KKYVHRRDRV LPPPPATREG CQAMIRLALR DGGKWVVTKF VKEHTHKLMS PSKVPWRGSG KHLVSEDEKD KRIRELSLEL
201: YNERQKCKRR CAAYEEQLNM ILNDLEKHTE HISEKVAAVV RSIREIEEEI SDSDGG
001: MEGNSLPEED VEMMENSDVM KTVTDEASPM VEPFIGMEFE SEEAAKSFYD NYATCMGFVM RVDAFRRSMR DGTVVWRRLV CNKEGFRRSR PRRSESRKPR
101: AITREGCKAL IVVKREKSGT WLVTKFEKEH NHPLLPLSPN VRRNFQLPQT PDEKDAKIRE LSAELSRERR RCTALQQQLD MVLKEMEEHS NHLTININSV
201: IQSVRDIESN TFTKQQT
101: AITREGCKAL IVVKREKSGT WLVTKFEKEH NHPLLPLSPN VRRNFQLPQT PDEKDAKIRE LSAELSRERR RCTALQQQLD MVLKEMEEHS NHLTININSV
201: IQSVRDIESN TFTKQQT
Arabidopsis Description
Far-red impaired responsive (FAR1) family protein [Source:UniProtKB/TrEMBL;Acc:Q84JA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.