Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 5.1 | 12.55 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 3.95 | 12.44 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 4.61 | 11.38 |
| KRH23208 | Soybean | nucleus | 4.61 | 10.94 |
| Zm00001d028472_P001 | Maize | nucleus | 11.02 | 9.78 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 10.53 | 9.54 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 10.53 | 9.38 |
| KRH10133 | Soybean | nucleus | 4.11 | 9.16 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 3.78 | 9.13 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 10.36 | 9.1 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 10.53 | 9.1 |
| GSMUA_Achr5P14700_001 | Banana | cytosol | 6.74 | 9.07 |
| Os03t0255400-01 | Rice | nucleus | 10.36 | 9.03 |
| KXG39753 | Sorghum | cytosol | 10.2 | 8.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P10090_001 | EnsemblPlants:GSMUA_Achr2T10090_001 | EnsemblPlantsGene:GSMUA_Achr2G10090_001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | PANTHER:PTHR31669 |
| PANTHER:PTHR31669:SF79 | PFAM:PF03101 | SEG:seg | UniParc:UPI00029640AE | UniProt:M0S6Q0 | MapMan:15.5.46 |
Description
Putative Protein FAR1-RELATED SEQUENCE 7 [Source:GMGC_GENE;Acc:GSMUA_Achr2G10090_001]
Coordinates
chr2:+:13355470..13358515
Molecular Weight (calculated)
69241.6 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.715
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGFMFSSPM IISPVDVEPR IADVDEMIES SVGRELFEPI LEPYEGMEFE SEEAARAFYH TYASQMGFKA RVSSFIRSKR DKTIISRQLV CSREGFRSTK
101: DTNGEGRTKR PRIITRVGCR AMIMVKKQSS GKWVVTKCEK IHNHVLGTQG KVVMLDYDPY LHEDEEVIEN PVGNETSMNS GAISDEMVVL PPEGEPGLEP
201: HEGMEFESEH EAQIFYKEYA KRAGFRARIS SYYRSKRDNS IISRLLVCSK EGFRAKKDEN AEERLQRPRA VTRIGCKAMI MVKKRDSGKW TVSKLVKHHN
301: HELIPRSASD DECSAEEDDE LVEMERAFVL HEGDAITEPY EGMEFESEDD AKIFYIAYSR HIGFNMRVST YYRSKRDKSI ISRLFVCSKE GFYVKKDMGG
401: ESKIKRPREA TRVGCKAMLM VKKNNSGKWV VSKFEKDHNH PLGSLSKIRK ESPTTRYNNL CREAMKYAEV GAASPDVYSV AMHALREAVE KVTAIKRKAG
501: GVADLGPVVG KCSIENRNKQ DSQIEPSTHL NQQSRTRSHP SESRSKSSYD RPPRKMRICN SGKQPRDHIG RSCPSKQVQL QQIDIVPHES VNMLFDEPVN
601: ELIQKGDG
101: DTNGEGRTKR PRIITRVGCR AMIMVKKQSS GKWVVTKCEK IHNHVLGTQG KVVMLDYDPY LHEDEEVIEN PVGNETSMNS GAISDEMVVL PPEGEPGLEP
201: HEGMEFESEH EAQIFYKEYA KRAGFRARIS SYYRSKRDNS IISRLLVCSK EGFRAKKDEN AEERLQRPRA VTRIGCKAMI MVKKRDSGKW TVSKLVKHHN
301: HELIPRSASD DECSAEEDDE LVEMERAFVL HEGDAITEPY EGMEFESEDD AKIFYIAYSR HIGFNMRVST YYRSKRDKSI ISRLFVCSKE GFYVKKDMGG
401: ESKIKRPREA TRVGCKAMLM VKKNNSGKWV VSKFEKDHNH PLGSLSKIRK ESPTTRYNNL CREAMKYAEV GAASPDVYSV AMHALREAVE KVTAIKRKAG
501: GVADLGPVVG KCSIENRNKQ DSQIEPSTHL NQQSRTRSHP SESRSKSSYD RPPRKMRICN SGKQPRDHIG RSCPSKQVQL QQIDIVPHES VNMLFDEPVN
601: ELIQKGDG
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.