Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G083800.1 | Wheat | nucleus | 95.31 | 93.93 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 96.04 | 93.17 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 74.05 | 75.26 |
| Os03t0255400-01 | Rice | nucleus | 62.17 | 60.74 |
| KXG39753 | Sorghum | cytosol | 55.72 | 54.29 |
| Zm00001d028472_P001 | Maize | nucleus | 50.73 | 50.51 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 10.26 | 28.34 |
| KRH23208 | Soybean | nucleus | 10.56 | 28.12 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 7.92 | 27.98 |
| KRH10133 | Soybean | nucleus | 10.56 | 26.37 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 9.24 | 25.0 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 8.65 | 23.98 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.38 | 10.53 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G220300.2 | EnsemblPlantsGene:TraesCS4B01G220300 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF79 |
| PFAM:PF03101 | SEG:seg | MapMan:15.5.46 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:463215864..463219185
Molecular Weight (calculated)
75497.9 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.691
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISSNEPSE VENIIGHEDD TELTPREGME FESEDAAREF YSLYARHAGF RIRISRYTRS RRDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR
101: VGCKAMIMIK KIGPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PHSTEVNPVD EPVEGMEFDS EEAAKLFYIN YARLNGFRAR ISRYCRSRRD
201: NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAESAA KSSDPDEAKV
301: EEYSAGIQCN STDSLTVLYN KLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTIPS
401: QLTMFQESTS KLMFIPTNLL TDSGLANSDN NHPSSCAFTS SGRQGRHGSE CSYLHAENRK EGCPEKYQNS TSSRATQGNH STYHGHSEET TVAIPAIPLT
501: LYMPLSRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR REKGPHPLVH ATALACGARV VPVEEAASLI KAIESKIRSG
601: GAKIARLPSS RLTRLVPEAV SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE ASELETDSEN CSGHENHDTA DC
101: VGCKAMIMIK KIGPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PHSTEVNPVD EPVEGMEFDS EEAAKLFYIN YARLNGFRAR ISRYCRSRRD
201: NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAESAA KSSDPDEAKV
301: EEYSAGIQCN STDSLTVLYN KLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTIPS
401: QLTMFQESTS KLMFIPTNLL TDSGLANSDN NHPSSCAFTS SGRQGRHGSE CSYLHAENRK EGCPEKYQNS TSSRATQGNH STYHGHSEET TVAIPAIPLT
501: LYMPLSRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR REKGPHPLVH ATALACGARV VPVEEAASLI KAIESKIRSG
601: GAKIARLPSS RLTRLVPEAV SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE ASELETDSEN CSGHENHDTA DC
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.