Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23208 | Soybean | nucleus | 81.32 | 86.72 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 46.89 | 66.32 |
| GSMUA_Achr5P14700_001 | Banana | cytosol | 26.37 | 15.93 |
| KRH66221 | Soybean | nucleus | 9.89 | 13.04 |
| KRH56435 | Soybean | nucleus | 10.62 | 12.03 |
| KRG99562 | Soybean | cytosol | 9.52 | 11.87 |
| KRH62480 | Soybean | nucleus | 10.26 | 11.62 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 27.11 | 10.69 |
| KRH46568 | Soybean | cytosol | 5.49 | 10.56 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 26.37 | 10.56 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 25.64 | 10.43 |
| Zm00001d028472_P001 | Maize | nucleus | 26.01 | 10.37 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 26.37 | 10.24 |
| Os03t0255400-01 | Rice | nucleus | 26.01 | 10.17 |
| KRH24623 | Soybean | nucleus | 9.16 | 9.51 |
| KXG39753 | Sorghum | cytosol | 24.18 | 9.43 |
| KRH10126 | Soybean | nucleus | 9.89 | 9.18 |
| KRH29624 | Soybean | nucleus | 9.52 | 8.81 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.16 | 4.11 |
Protein Annotations
| EMBL:ACUP02009119 | EnsemblPlants:KRH10133 | EnsemblPlantsGene:GLYMA_15G030200 | EntrezGene:100810283 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 |
| ncoils:Coil | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF83 | PFAM:PF03101 | ProteinID:KRH10133 | ProteinID:KRH10133.1 |
| SEG:seg | UniParc:UPI0006ED8EFA | UniProt:A0A0R0G5C4 | MapMan:15.5.46 | : | : |
Description
hypothetical protein
Coordinates
chr15:-:2422328..2425837
Molecular Weight (calculated)
31477.3 Da
IEP (calculated)
6.439
GRAVY (calculated)
-0.785
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIAHLDCDL CCRAMDHQSG QGFDSDDSDL DMQAEISDKH EKVDEFSKNL EICGGEDEMF VEQPVADIST DIEAVEPFIG MEFNSREEAR EFYIAYGRRI
101: GFTVRIHHNR RSRVNNQVIG QDFVCSKEGF RAKKYLHRKD RVLPPPPATR EGCQAMIRLA LRDRGKWVVT KFVKEHTHKL MSPSKVPCRG SGKHLVSEDE
201: KDKRIRELSL ELYNERQKCK RRCAAYEEQL NVILNDLEKH TEHISKKVAA VVRSIREIEE EKSDSDGGQL EPS
101: GFTVRIHHNR RSRVNNQVIG QDFVCSKEGF RAKKYLHRKD RVLPPPPATR EGCQAMIRLA LRDRGKWVVT KFVKEHTHKL MSPSKVPCRG SGKHLVSEDE
201: KDKRIRELSL ELYNERQKCK RRCAAYEEQL NVILNDLEKH TEHISKKVAA VVRSIREIEE EKSDSDGGQL EPS
001: MEGNSLPEED VEMMENSDVM KTVTDEASPM VEPFIGMEFE SEEAAKSFYD NYATCMGFVM RVDAFRRSMR DGTVVWRRLV CNKEGFRRSR PRRSESRKPR
101: AITREGCKAL IVVKREKSGT WLVTKFEKEH NHPLLPLSPN VRRNFQLPQT PDEKDAKIRE LSAELSRERR RCTALQQQLD MVLKEMEEHS NHLTININSV
201: IQSVRDIESN TFTKQQT
101: AITREGCKAL IVVKREKSGT WLVTKFEKEH NHPLLPLSPN VRRNFQLPQT PDEKDAKIRE LSAELSRERR RCTALQQQLD MVLKEMEEHS NHLTININSV
201: IQSVRDIESN TFTKQQT
Arabidopsis Description
Far-red impaired responsive (FAR1) family protein [Source:UniProtKB/TrEMBL;Acc:Q84JA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.