Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62480 | Soybean | nucleus | 95.02 | 95.02 |
| Bra037724.1-P | Field mustard | cytosol | 24.9 | 74.07 |
| CDY23353 | Canola | cytosol | 24.9 | 74.07 |
| CDY30396 | Canola | cytosol | 24.9 | 74.07 |
| AT2G43280.1 | Thale cress | cytosol | 58.09 | 67.96 |
| Bra037723.1-P | Field mustard | nucleus | 54.36 | 65.5 |
| CDY23354 | Canola | cytosol, mitochondrion, plastid | 56.85 | 57.08 |
| CDY30397 | Canola | cytosol, plastid | 56.02 | 53.15 |
| KRG99562 | Soybean | cytosol | 41.49 | 45.66 |
| KRH66221 | Soybean | nucleus | 36.93 | 43.0 |
| KRH46568 | Soybean | cytosol | 23.65 | 40.14 |
| KRH24623 | Soybean | nucleus | 32.78 | 30.04 |
| KRH10126 | Soybean | nucleus | 34.02 | 27.89 |
| KRH29624 | Soybean | nucleus | 31.54 | 25.76 |
| KRH10133 | Soybean | nucleus | 12.03 | 10.62 |
| KRH23208 | Soybean | nucleus | 11.2 | 10.55 |
Protein Annotations
| EntrezGene:100793266 | MapMan:15.5.46 | EMBL:ACUP02004115 | ncoils:Coil | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 |
| EnsemblPlantsGene:GLYMA_06G323400 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010018 | GO:GO:0042753 | GO:GO:0045893 | UniProt:I1KFX4 | EnsemblPlants:KRH56435 | ProteinID:KRH56435 |
| ProteinID:KRH56435.1 | ProteinID:KRH56436.1 | ProteinID:KRH56437.1 | PFAM:PF03101 | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF46 |
| UniParc:UPI0002339466 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:51122782..51126899
Molecular Weight (calculated)
27809.0 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.743
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQLVDGND DMGVSGDVGL STYEVQMHQE TYEVDPNEEC RVLESSSGGE VGICDDHAIQ EPYEGMEFES EDAAKIFYDE YARRLGFVMR VMSCRRSERD
101: GRILARRLGC NKEGYCVSIR GKFSSVRKPR ASTREGCKAM IHIKYNKSGK WVITKFVKDH NHPLVVSPRE ARQTMDEKDK KIQELTAELR HKKRLCATYQ
201: EQLTSFMKIV EEHNEKLSAK IHHVVNNLKE FESIEELLHQ T
101: GRILARRLGC NKEGYCVSIR GKFSSVRKPR ASTREGCKAM IHIKYNKSGK WVITKFVKDH NHPLVVSPRE ARQTMDEKDK KIQELTAELR HKKRLCATYQ
201: EQLTSFMKIV EEHNEKLSAK IHHVVNNLKE FESIEELLHQ T
001: MEDEDDPTTK NSNNTDDFAI EPREGIIFES EDAAKMFYDD YSRRLGFVMR VMSCRRSEKD GRILARRFGC NKEGHCVSIR GKFGSVRKPR PSTREGCKAM
101: IHVKYDRSGK WVITKFVKEH NHPLVVSPRE ARHTLDEKDK RIQELTIELR NKKRLCAAYK EQLDAFAKIV EEHSNQIAKK VENVVNNLKE FEHLEHALLR
201: SKQDAI
101: IHVKYDRSGK WVITKFVKEH NHPLVVSPRE ARHTLDEKDK RIQELTIELR NKKRLCAAYK EQLDAFAKIV EEHSNQIAKK VENVVNNLKE FEHLEHALLR
201: SKQDAI
Arabidopsis Description
Far-red impaired responsive (FAR1) family protein [Source:UniProtKB/TrEMBL;Acc:Q84J94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.